Protein–RNA interactions for Protein: P57743

LSM3, U6 snRNA-associated Sm-like protein LSm3, yeastyeast

Known RBP Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM3P57743 YDR034C-CYDR034C-C 1317 nt0.64□□□□□ -2.31
LSM3P57743 YFL002W-BYFL002W-B 1317 nt0.64□□□□□ -2.31
LSM3P57743 YGR161W-AYGR161W-A 1317 nt0.64□□□□□ -2.31
LSM3P57743 YLR410W-AYLR410W-A 1317 nt0.64□□□□□ -2.31
LSM3P57743 YBL100W-AYBL100W-A 1317 nt0.64□□□□□ -2.31
LSM3P57743 YOR192C-AYOR192C-A 1317 nt0.64□□□□□ -2.31
LSM3P57743 YCL020WYCL020W 1317 nt0.64□□□□□ -2.31
LSM3P57743 NUT1YGL151W 3399 nt0.63□□□□□ -2.31
LSM3P57743 HTB1YDR224C 396 nt0.63□□□□□ -2.31
LSM3P57743 YER023C-AYER023C-A 213 nt0.63□□□□□ -2.31
LSM3P57743 UTP13YLR222C 2454 nt0.63□□□□□ -2.31
LSM3P57743 TOF2YKR010C 2316 nt0.63□□□□□ -2.31
LSM3P57743 CYC7YEL039C 342 nt0.62□□□□□ -2.31
LSM3P57743 LOC1YFR001W 615 nt0.62□□□□□ -2.31
LSM3P57743 YHR050W-AYHR050W-A 171 nt0.62□□□□□ -2.31
LSM3P57743 NBL1YHR199C-A 222 nt0.61□□□□□ -2.31
LSM3P57743 YBR012CYBR012C 420 nt0.61□□□□□ -2.31
LSM3P57743 SPR2YOR214C 711 nt0.61□□□□□ -2.31
LSM3P57743 NUP157YER105C 4176 nt0.6□□□□□ -2.31
LSM3P57743 POL32YJR043C 1053 nt0.6□□□□□ -2.31
LSM3P57743 YMR272W-AYMR272W-A 114 nt0.6□□□□□ -2.31
LSM3P57743 MPT5YGL178W 2580 nt0.59□□□□□ -2.31
LSM3P57743 HDA3YPR179C 1968 nt0.59□□□□□ -2.31
LSM3P57743 UTP20YBL004W 7482 nt0.59□□□□□ -2.31
LSM3P57743 YGR045CYGR045C 363 nt0.59□□□□□ -2.31
LSM3P57743 RPL37AYLR185W 267 nt0.59□□□□□ -2.31
LSM3P57743 YLR412C-AYLR412C-A 207 nt0.59□□□□□ -2.31
LSM3P57743 ATP20YPR020W 348 nt0.59□□□□□ -2.31
LSM3P57743 RIM20YOR275C 1986 nt0.59□□□□□ -2.32
LSM3P57743 NOC3YLR002C 1992 nt0.58□□□□□ -2.32
LSM3P57743 URM1YIL008W 300 nt0.58□□□□□ -2.32
LSM3P57743 YMR031W-AYMR031W-A 327 nt0.58□□□□□ -2.32
LSM3P57743 YOR364WYOR364W 369 nt0.58□□□□□ -2.32
LSM3P57743 YPR159C-AYPR159C-A 102 nt0.58□□□□□ -2.32
LSM3P57743 SWI6YLR182W 2412 nt0.57□□□□□ -2.32
LSM3P57743 YDL073WYDL073W 2955 nt0.57□□□□□ -2.32
LSM3P57743 tF(GAA)BtF(GAA)B 73 nt0.57□□□□□ -2.32
LSM3P57743 tF(GAA)FtF(GAA)F 73 nt0.57□□□□□ -2.32
LSM3P57743 tF(GAA)GtF(GAA)G 73 nt0.57□□□□□ -2.32
LSM3P57743 tF(GAA)H1tF(GAA)H1 73 nt0.57□□□□□ -2.32
LSM3P57743 tF(GAA)H2tF(GAA)H2 73 nt0.57□□□□□ -2.32
LSM3P57743 tF(GAA)MtF(GAA)M 73 nt0.57□□□□□ -2.32
LSM3P57743 tF(GAA)P1tF(GAA)P1 73 nt0.57□□□□□ -2.32
LSM3P57743 tF(GAA)P2tF(GAA)P2 73 nt0.57□□□□□ -2.32
LSM3P57743 YER087C-AYER087C-A 552 nt0.57□□□□□ -2.32
LSM3P57743 HIT1YJR055W 495 nt0.57□□□□□ -2.32
LSM3P57743 YBR221W-AYBR221W-A 105 nt0.57□□□□□ -2.32
LSM3P57743 TDA2YER071C 381 nt0.56□□□□□ -2.32
LSM3P57743 CUP1-1YHR053C 186 nt0.56□□□□□ -2.32
LSM3P57743 CUP1-2YHR055C 186 nt0.56□□□□□ -2.32
LSM3P57743 ACF4YJR083C 930 nt0.56□□□□□ -2.32
LSM3P57743 TFB6YOR352W 1032 nt0.56□□□□□ -2.32
LSM3P57743 NUT2YPR168W 474 nt0.56□□□□□ -2.32
LSM3P57743 YBR200W-AYBR200W-A 165 nt0.56□□□□□ -2.32
LSM3P57743 BUD26YDR241W 288 nt0.55□□□□□ -2.32
LSM3P57743 SMB1YER029C 591 nt0.55□□□□□ -2.32
LSM3P57743 MXR1YER042W 555 nt0.55□□□□□ -2.32
LSM3P57743 SET3YKR029C 2256 nt0.55□□□□□ -2.32
LSM3P57743 ZIP1YDR285W 2628 nt0.55□□□□□ -2.32
LSM3P57743 YDL206WYDL206W 2289 nt0.54□□□□□ -2.32
LSM3P57743 SRP14YDL092W 441 nt0.54□□□□□ -2.32
LSM3P57743 YDR003W-AYDR003W-A 123 nt0.54□□□□□ -2.32
LSM3P57743 YHR028W-AYHR028W-A 321 nt0.54□□□□□ -2.32
LSM3P57743 YOL106WYOL106W 354 nt0.54□□□□□ -2.32
LSM3P57743 YOP1YPR028W 543 nt0.54□□□□□ -2.32
LSM3P57743 AIM44YPL158C 2277 nt0.54□□□□□ -2.32
LSM3P57743 VPS52YDR484W 1926 nt0.54□□□□□ -2.32
LSM3P57743 YGL109WYGL109W 324 nt0.53□□□□□ -2.32
LSM3P57743 SWI5YDR146C 2130 nt0.52□□□□□ -2.33
LSM3P57743 YBL068W-AYBL068W-A 237 nt0.52□□□□□ -2.33
LSM3P57743 YOR199WYOR199W 330 nt0.52□□□□□ -2.33
LSM3P57743 PIG1YLR273C 1947 nt0.52□□□□□ -2.33
LSM3P57743 snR79snR79 84 nt0.51□□□□□ -2.33
LSM3P57743 YDL196WYDL196W 330 nt0.51□□□□□ -2.33
LSM3P57743 BMT5YIL096C 1011 nt0.51□□□□□ -2.33
LSM3P57743 PHS1YJL097W 654 nt0.51□□□□□ -2.33
LSM3P57743 SAG1YJR004C 1953 nt0.5□□□□□ -2.33
LSM3P57743 YDL152WYDL152W 366 nt0.5□□□□□ -2.33
LSM3P57743 SWF1YDR126W 1011 nt0.5□□□□□ -2.33
LSM3P57743 YJR140W-AYJR140W-A 150 nt0.5□□□□□ -2.33
LSM3P57743 YMR304C-AYMR304C-A 351 nt0.5□□□□□ -2.33
LSM3P57743 RUF22RUF22 515 nt0.5□□□□□ -2.33
LSM3P57743 RRI2YOL117W 1938 nt0.5□□□□□ -2.33
LSM3P57743 STO1YMR125W 2586 nt0.5□□□□□ -2.33
LSM3P57743 YCK3YER123W 1575 nt0.49□□□□□ -2.33
LSM3P57743 YER158W-AYER158W-A 216 nt0.49□□□□□ -2.33
LSM3P57743 YKL145W-AYKL145W-A 93 nt0.49□□□□□ -2.33
LSM3P57743 YOR218CYOR218C 420 nt0.49□□□□□ -2.33
LSM3P57743 RKR1YMR247C 4689 nt0.48□□□□□ -2.33
LSM3P57743 UTP10YJL109C 5310 nt0.48□□□□□ -2.33
LSM3P57743 tT(UGU)Q1tT(UGU)Q1 76 nt0.48□□□□□ -2.33
LSM3P57743 CMC1YKL137W 336 nt0.48□□□□□ -2.33
LSM3P57743 RPL38YLR325C 237 nt0.48□□□□□ -2.33
LSM3P57743 FIG4YNL325C 2640 nt0.48□□□□□ -2.33
LSM3P57743 PRP16YKR086W 3216 nt0.47□□□□□ -2.33
LSM3P57743 HNT1YDL125C 477 nt0.47□□□□□ -2.33
LSM3P57743 LIN1YHR156C 1023 nt0.47□□□□□ -2.33
LSM3P57743 COX7YMR256C 183 nt0.47□□□□□ -2.33
LSM3P57743 YNL150WYNL150W 408 nt0.47□□□□□ -2.33
LSM3P57743 YOR032W-AYOR032W-A 201 nt0.47□□□□□ -2.33
Retrieved 100 of 7,029 protein–RNA pairs in 81.5 ms