Protein–RNA interactions for Protein: P55084

HADHB, Trifunctional enzyme subunit beta, mitochondrial, humanhuman

Known RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHBP55084 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HADHBP55084 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
HADHBP55084 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HADHBP55084 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.21■□□□□ 0.99
HADHBP55084 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.2■□□□□ 0.99
HADHBP55084 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HADHBP55084 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HADHBP55084 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HADHBP55084 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HADHBP55084 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.2■□□□□ 0.98
HADHBP55084 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
HADHBP55084 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.2■□□□□ 0.98
HADHBP55084 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
HADHBP55084 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
HADHBP55084 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HADHBP55084 PTBP1P-201ENST00000554374 1601 ntBASIC21.2■□□□□ 0.98
HADHBP55084 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.2■□□□□ 0.98
HADHBP55084 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HADHBP55084 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
HADHBP55084 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.2■□□□□ 0.98
HADHBP55084 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.2■□□□□ 0.98
HADHBP55084 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HADHBP55084 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.2■□□□□ 0.98
HADHBP55084 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HADHBP55084 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HADHBP55084 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.2■□□□□ 0.98
HADHBP55084 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HADHBP55084 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HADHBP55084 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.19■□□□□ 0.98
HADHBP55084 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.19■□□□□ 0.98
HADHBP55084 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.19■□□□□ 0.98
HADHBP55084 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.19■□□□□ 0.98
HADHBP55084 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.19■□□□□ 0.98
HADHBP55084 NTF6G-201ENST00000591094 616 ntBASIC21.19■□□□□ 0.98
HADHBP55084 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HADHBP55084 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HADHBP55084 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HADHBP55084 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.19■□□□□ 0.98
HADHBP55084 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HADHBP55084 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.19■□□□□ 0.98
HADHBP55084 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.19■□□□□ 0.98
HADHBP55084 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.19■□□□□ 0.98
HADHBP55084 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HADHBP55084 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HADHBP55084 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.18■□□□□ 0.98
HADHBP55084 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HADHBP55084 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HADHBP55084 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.18■□□□□ 0.98
HADHBP55084 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HADHBP55084 AL158211.5-201ENST00000623583 2518 ntBASIC21.18■□□□□ 0.98
HADHBP55084 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.18■□□□□ 0.98
HADHBP55084 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HADHBP55084 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.18■□□□□ 0.98
HADHBP55084 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.18■□□□□ 0.98
HADHBP55084 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.18■□□□□ 0.98
HADHBP55084 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.18■□□□□ 0.98
HADHBP55084 AC016405.3-201ENST00000607710 860 ntBASIC21.18■□□□□ 0.98
HADHBP55084 AC013268.1-206ENST00000638368 961 ntBASIC21.18■□□□□ 0.98
HADHBP55084 AC112229.1-201ENST00000639295 961 ntBASIC21.18■□□□□ 0.98
HADHBP55084 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
HADHBP55084 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HADHBP55084 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HADHBP55084 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HADHBP55084 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HADHBP55084 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HADHBP55084 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.17■□□□□ 0.98
HADHBP55084 AC034268.1-201ENST00000441047 882 ntBASIC21.17■□□□□ 0.98
HADHBP55084 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.17■□□□□ 0.98
HADHBP55084 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
HADHBP55084 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.17■□□□□ 0.98
HADHBP55084 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HADHBP55084 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.17■□□□□ 0.98
HADHBP55084 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
HADHBP55084 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
HADHBP55084 AC100791.3-201ENST00000617619 330 ntBASIC21.17■□□□□ 0.98
HADHBP55084 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
HADHBP55084 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HADHBP55084 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.17■□□□□ 0.98
HADHBP55084 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
HADHBP55084 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HADHBP55084 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HADHBP55084 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
HADHBP55084 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.16■□□□□ 0.98
HADHBP55084 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HADHBP55084 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HADHBP55084 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
HADHBP55084 KRT18P11-201ENST00000435214 1283 ntBASIC21.16■□□□□ 0.98
HADHBP55084 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
HADHBP55084 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.16■□□□□ 0.98
HADHBP55084 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.16■□□□□ 0.98
HADHBP55084 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
HADHBP55084 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HADHBP55084 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
HADHBP55084 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
HADHBP55084 TREX1-205ENST00000625293 1783 ntBASIC21.15■□□□□ 0.98
HADHBP55084 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HADHBP55084 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
HADHBP55084 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HADHBP55084 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.15■□□□□ 0.98
HADHBP55084 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms