Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
PDE1AP54750 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PDE1AP54750 KRT17P1-201ENST00000399211 1546 ntBASIC24.76■■□□□ 1.55
PDE1AP54750 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PDE1AP54750 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC24.76■■□□□ 1.55
PDE1AP54750 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
PDE1AP54750 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PDE1AP54750 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC24.76■■□□□ 1.55
PDE1AP54750 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC24.76■■□□□ 1.55
PDE1AP54750 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC24.76■■□□□ 1.55
PDE1AP54750 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC24.76■■□□□ 1.55
PDE1AP54750 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC24.76■■□□□ 1.55
PDE1AP54750 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
PDE1AP54750 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PDE1AP54750 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PDE1AP54750 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
PDE1AP54750 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC24.75■■□□□ 1.55
PDE1AP54750 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC24.75■■□□□ 1.55
PDE1AP54750 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC24.75■■□□□ 1.55
PDE1AP54750 MARS-234ENST00000630571 216 ntTSL 5 BASIC24.75■■□□□ 1.55
PDE1AP54750 MARS-235ENST00000630803 183 ntTSL 3 BASIC24.75■■□□□ 1.55
PDE1AP54750 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PDE1AP54750 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PDE1AP54750 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PDE1AP54750 ME2-218ENST00000640965 2476 ntTSL 5 BASIC24.75■■□□□ 1.55
PDE1AP54750 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PDE1AP54750 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PDE1AP54750 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
PDE1AP54750 PTBP1P-201ENST00000554374 1601 ntBASIC24.75■■□□□ 1.55
PDE1AP54750 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
PDE1AP54750 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PDE1AP54750 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC24.75■■□□□ 1.55
PDE1AP54750 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC24.74■■□□□ 1.55
PDE1AP54750 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PDE1AP54750 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
PDE1AP54750 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC24.74■■□□□ 1.55
PDE1AP54750 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PDE1AP54750 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PDE1AP54750 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PDE1AP54750 AC092666.2-201ENST00000613287 246 ntBASIC24.74■■□□□ 1.55
PDE1AP54750 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PDE1AP54750 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC24.74■■□□□ 1.55
PDE1AP54750 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
PDE1AP54750 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC24.74■■□□□ 1.55
PDE1AP54750 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
PDE1AP54750 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC24.74■■□□□ 1.55
PDE1AP54750 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PDE1AP54750 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PDE1AP54750 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PDE1AP54750 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC24.73■■□□□ 1.55
PDE1AP54750 METTL15-202ENST00000403099 795 ntTSL 5 BASIC24.73■■□□□ 1.55
PDE1AP54750 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC24.73■■□□□ 1.55
PDE1AP54750 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC24.73■■□□□ 1.55
PDE1AP54750 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PDE1AP54750 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PDE1AP54750 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PDE1AP54750 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
PDE1AP54750 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC24.72■■□□□ 1.55
PDE1AP54750 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC24.72■■□□□ 1.55
PDE1AP54750 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC24.72■■□□□ 1.55
PDE1AP54750 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC24.72■■□□□ 1.55
PDE1AP54750 AF201337.1-201ENST00000520239 748 ntBASIC24.72■■□□□ 1.55
PDE1AP54750 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
PDE1AP54750 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
PDE1AP54750 AC105036.2-201ENST00000569468 176 ntBASIC24.72■■□□□ 1.55
PDE1AP54750 TCF3P1-201ENST00000423021 1937 ntBASIC24.72■■□□□ 1.55
PDE1AP54750 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PDE1AP54750 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PDE1AP54750 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PDE1AP54750 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
PDE1AP54750 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PDE1AP54750 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PDE1AP54750 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PDE1AP54750 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PDE1AP54750 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
PDE1AP54750 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PDE1AP54750 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PDE1AP54750 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PDE1AP54750 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PDE1AP54750 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
PDE1AP54750 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
PDE1AP54750 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC24.71■■□□□ 1.55
PDE1AP54750 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC24.71■■□□□ 1.55
PDE1AP54750 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC24.71■■□□□ 1.55
PDE1AP54750 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
PDE1AP54750 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PDE1AP54750 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PDE1AP54750 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PDE1AP54750 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PDE1AP54750 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC24.7■■□□□ 1.55
PDE1AP54750 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC24.7■■□□□ 1.54
PDE1AP54750 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PDE1AP54750 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
PDE1AP54750 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC24.7■■□□□ 1.54
PDE1AP54750 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
PDE1AP54750 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
PDE1AP54750 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC24.7■■□□□ 1.54
PDE1AP54750 OAS3-207ENST00000551007 998 ntTSL 2 BASIC24.7■■□□□ 1.54
PDE1AP54750 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PDE1AP54750 AL589743.5-201ENST00000616611 1050 ntBASIC24.7■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms