Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATP1B3P54709 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
ATP1B3P54709 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
ATP1B3P54709 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
ATP1B3P54709 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATP1B3P54709 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.49■□□□□ 0.39
ATP1B3P54709 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.49■□□□□ 0.39
ATP1B3P54709 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.49■□□□□ 0.39
ATP1B3P54709 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ATP1B3P54709 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ATP1B3P54709 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP1B3P54709 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP1B3P54709 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP1B3P54709 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
ATP1B3P54709 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.48■□□□□ 0.39
ATP1B3P54709 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
ATP1B3P54709 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
ATP1B3P54709 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ATP1B3P54709 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP1B3P54709 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ATP1B3P54709 ZNRF2P3-201ENST00000424200 374 ntBASIC17.48■□□□□ 0.39
ATP1B3P54709 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.48■□□□□ 0.39
ATP1B3P54709 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.48■□□□□ 0.39
ATP1B3P54709 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
ATP1B3P54709 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP1B3P54709 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP1B3P54709 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP1B3P54709 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP1B3P54709 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP1B3P54709 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP1B3P54709 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATP1B3P54709 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP1B3P54709 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP1B3P54709 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATP1B3P54709 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATP1B3P54709 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
ATP1B3P54709 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
ATP1B3P54709 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
ATP1B3P54709 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP1B3P54709 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.47■□□□□ 0.39
ATP1B3P54709 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
ATP1B3P54709 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.47■□□□□ 0.39
ATP1B3P54709 AC007322.3-201ENST00000426526 701 ntBASIC17.47■□□□□ 0.39
ATP1B3P54709 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.47■□□□□ 0.39
ATP1B3P54709 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.47■□□□□ 0.39
ATP1B3P54709 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.47■□□□□ 0.39
ATP1B3P54709 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.47■□□□□ 0.39
ATP1B3P54709 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.47■□□□□ 0.39
ATP1B3P54709 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.47■□□□□ 0.39
ATP1B3P54709 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP1B3P54709 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP1B3P54709 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATP1B3P54709 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.47■□□□□ 0.39
ATP1B3P54709 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
ATP1B3P54709 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP1B3P54709 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP1B3P54709 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATP1B3P54709 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP1B3P54709 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP1B3P54709 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP1B3P54709 AL512408.1-201ENST00000569378 2000 ntBASIC17.47■□□□□ 0.39
ATP1B3P54709 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.47■□□□□ 0.39
ATP1B3P54709 RBM17P2-201ENST00000616397 1405 ntBASIC17.47■□□□□ 0.39
ATP1B3P54709 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
ATP1B3P54709 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP1B3P54709 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP1B3P54709 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
ATP1B3P54709 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.46■□□□□ 0.39
ATP1B3P54709 AL162377.1-201ENST00000618844 1793 ntBASIC17.46■□□□□ 0.39
ATP1B3P54709 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
ATP1B3P54709 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATP1B3P54709 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP1B3P54709 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
ATP1B3P54709 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
ATP1B3P54709 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP1B3P54709 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP1B3P54709 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP1B3P54709 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.46■□□□□ 0.39
ATP1B3P54709 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.46■□□□□ 0.39
ATP1B3P54709 AC091799.1-201ENST00000422823 811 ntBASIC17.46■□□□□ 0.39
ATP1B3P54709 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.46■□□□□ 0.39
ATP1B3P54709 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
ATP1B3P54709 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.46■□□□□ 0.39
ATP1B3P54709 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.46■□□□□ 0.39
ATP1B3P54709 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATP1B3P54709 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATP1B3P54709 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATP1B3P54709 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
ATP1B3P54709 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP1B3P54709 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP1B3P54709 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP1B3P54709 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.45■□□□□ 0.38
ATP1B3P54709 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP1B3P54709 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATP1B3P54709 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP1B3P54709 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP1B3P54709 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
ATP1B3P54709 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.45■□□□□ 0.38
ATP1B3P54709 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.45■□□□□ 0.38
ATP1B3P54709 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms