Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATXN3P54252 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATXN3P54252 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATXN3P54252 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATXN3P54252 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATXN3P54252 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.56■□□□□ 0.88
ATXN3P54252 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATXN3P54252 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATXN3P54252 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATXN3P54252 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.55■□□□□ 0.88
ATXN3P54252 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATXN3P54252 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ATXN3P54252 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATXN3P54252 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.55■□□□□ 0.88
ATXN3P54252 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.55■□□□□ 0.88
ATXN3P54252 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATXN3P54252 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATXN3P54252 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATXN3P54252 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.55■□□□□ 0.88
ATXN3P54252 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
ATXN3P54252 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.55■□□□□ 0.88
ATXN3P54252 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATXN3P54252 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATXN3P54252 AL121603.2-201ENST00000557373 2117 ntBASIC20.55■□□□□ 0.88
ATXN3P54252 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATXN3P54252 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.55■□□□□ 0.88
ATXN3P54252 CYP2T3P-201ENST00000601990 817 ntBASIC20.55■□□□□ 0.88
ATXN3P54252 FAM21FP-204ENST00000608637 956 ntBASIC20.55■□□□□ 0.88
ATXN3P54252 AC100791.3-201ENST00000617619 330 ntBASIC20.55■□□□□ 0.88
ATXN3P54252 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.55■□□□□ 0.88
ATXN3P54252 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ATXN3P54252 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATXN3P54252 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.55■□□□□ 0.88
ATXN3P54252 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.54■□□□□ 0.88
ATXN3P54252 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATXN3P54252 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.54■□□□□ 0.88
ATXN3P54252 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ATXN3P54252 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATXN3P54252 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATXN3P54252 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ATXN3P54252 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATXN3P54252 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATXN3P54252 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATXN3P54252 ECEL1P3-201ENST00000427961 737 ntBASIC20.54■□□□□ 0.88
ATXN3P54252 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.54■□□□□ 0.88
ATXN3P54252 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.54■□□□□ 0.88
ATXN3P54252 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
ATXN3P54252 AC008403.3-201ENST00000598924 454 ntBASIC20.54■□□□□ 0.88
ATXN3P54252 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.54■□□□□ 0.88
ATXN3P54252 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.54■□□□□ 0.88
ATXN3P54252 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATXN3P54252 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATXN3P54252 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATXN3P54252 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ATXN3P54252 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATXN3P54252 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.54■□□□□ 0.88
ATXN3P54252 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATXN3P54252 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATXN3P54252 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.53■□□□□ 0.88
ATXN3P54252 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATXN3P54252 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.53■□□□□ 0.88
ATXN3P54252 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.53■□□□□ 0.88
ATXN3P54252 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.53■□□□□ 0.88
ATXN3P54252 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.53■□□□□ 0.88
ATXN3P54252 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.53■□□□□ 0.88
ATXN3P54252 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.53■□□□□ 0.88
ATXN3P54252 AC092368.3-202ENST00000574180 1591 ntBASIC20.53■□□□□ 0.88
ATXN3P54252 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.53■□□□□ 0.88
ATXN3P54252 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATXN3P54252 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.53■□□□□ 0.88
ATXN3P54252 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
ATXN3P54252 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
ATXN3P54252 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATXN3P54252 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATXN3P54252 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.53■□□□□ 0.88
ATXN3P54252 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.53■□□□□ 0.88
ATXN3P54252 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
ATXN3P54252 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATXN3P54252 RNF165-205ENST00000588679 2904 ntBASIC20.52■□□□□ 0.88
ATXN3P54252 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATXN3P54252 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATXN3P54252 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
ATXN3P54252 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATXN3P54252 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATXN3P54252 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
ATXN3P54252 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.52■□□□□ 0.88
ATXN3P54252 AC245052.3-201ENST00000450182 901 ntBASIC20.52■□□□□ 0.88
ATXN3P54252 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.52■□□□□ 0.88
ATXN3P54252 PNMA6B-201ENST00000538162 1200 ntBASIC20.52■□□□□ 0.88
ATXN3P54252 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.52■□□□□ 0.88
ATXN3P54252 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
ATXN3P54252 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.52■□□□□ 0.88
ATXN3P54252 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATXN3P54252 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.52■□□□□ 0.87
ATXN3P54252 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
ATXN3P54252 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.87
ATXN3P54252 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.51■□□□□ 0.87
ATXN3P54252 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATXN3P54252 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATXN3P54252 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms