Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCR9P51686 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.77■□□□□ 0.44
CCR9P51686 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.44
CCR9P51686 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCR9P51686 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCR9P51686 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCR9P51686 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.77■□□□□ 0.44
CCR9P51686 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCR9P51686 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCR9P51686 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.77■□□□□ 0.44
CCR9P51686 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCR9P51686 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
CCR9P51686 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCR9P51686 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CCR9P51686 AC098818.2-201ENST00000564925 2320 ntBASIC17.77■□□□□ 0.43
CCR9P51686 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CCR9P51686 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.77■□□□□ 0.43
CCR9P51686 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.77■□□□□ 0.43
CCR9P51686 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CCR9P51686 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
CCR9P51686 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCR9P51686 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCR9P51686 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCR9P51686 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCR9P51686 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.76■□□□□ 0.43
CCR9P51686 CCDC92B-201ENST00000575506 885 ntBASIC17.76■□□□□ 0.43
CCR9P51686 AC243732.1-201ENST00000612648 864 ntBASIC17.76■□□□□ 0.43
CCR9P51686 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.76■□□□□ 0.43
CCR9P51686 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCR9P51686 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.76■□□□□ 0.43
CCR9P51686 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCR9P51686 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCR9P51686 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCR9P51686 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CCR9P51686 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CCR9P51686 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCR9P51686 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCR9P51686 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCR9P51686 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCR9P51686 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.75■□□□□ 0.43
CCR9P51686 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.75■□□□□ 0.43
CCR9P51686 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.75■□□□□ 0.43
CCR9P51686 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.75■□□□□ 0.43
CCR9P51686 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.75■□□□□ 0.43
CCR9P51686 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCR9P51686 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CCR9P51686 KRT8P36-201ENST00000489121 1440 ntBASIC17.75■□□□□ 0.43
CCR9P51686 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCR9P51686 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCR9P51686 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CCR9P51686 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CCR9P51686 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.75■□□□□ 0.43
CCR9P51686 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCR9P51686 SLC7A5P2-201ENST00000553010 536 ntBASIC17.75■□□□□ 0.43
CCR9P51686 AP001160.3-201ENST00000601484 763 ntBASIC17.75■□□□□ 0.43
CCR9P51686 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CCR9P51686 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CCR9P51686 LINC02228-203ENST00000641970 1355 ntBASIC17.75■□□□□ 0.43
CCR9P51686 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCR9P51686 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCR9P51686 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.75■□□□□ 0.43
CCR9P51686 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCR9P51686 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCR9P51686 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCR9P51686 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCR9P51686 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCR9P51686 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCR9P51686 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.74■□□□□ 0.43
CCR9P51686 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCR9P51686 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCR9P51686 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.74■□□□□ 0.43
CCR9P51686 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCR9P51686 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.74■□□□□ 0.43
CCR9P51686 AC104187.1-201ENST00000607510 612 ntBASIC17.74■□□□□ 0.43
CCR9P51686 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.74■□□□□ 0.43
CCR9P51686 AC116562.4-201ENST00000641316 2276 ntBASIC17.74■□□□□ 0.43
CCR9P51686 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CCR9P51686 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.74■□□□□ 0.43
CCR9P51686 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CCR9P51686 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CCR9P51686 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.74■□□□□ 0.43
CCR9P51686 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCR9P51686 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCR9P51686 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCR9P51686 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.73■□□□□ 0.43
CCR9P51686 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CCR9P51686 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCR9P51686 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCR9P51686 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CCR9P51686 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCR9P51686 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
CCR9P51686 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCR9P51686 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCR9P51686 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCR9P51686 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCR9P51686 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCR9P51686 AC091799.1-201ENST00000422823 811 ntBASIC17.73■□□□□ 0.43
CCR9P51686 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.73■□□□□ 0.43
CCR9P51686 AC142381.2-201ENST00000566120 298 ntBASIC17.73■□□□□ 0.43
CCR9P51686 AL139246.5-201ENST00000606645 996 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms