Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB28P51157 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.53■□□□□ 0.72
RAB28P51157 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.53■□□□□ 0.72
RAB28P51157 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
RAB28P51157 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB28P51157 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RAB28P51157 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RAB28P51157 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.53■□□□□ 0.72
RAB28P51157 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB28P51157 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RAB28P51157 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.53■□□□□ 0.72
RAB28P51157 RNA5SP413-201ENST00000516373 109 ntBASIC19.53■□□□□ 0.72
RAB28P51157 CD99P1-205ENST00000527459 561 ntBASIC19.53■□□□□ 0.72
RAB28P51157 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.53■□□□□ 0.72
RAB28P51157 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB28P51157 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB28P51157 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RAB28P51157 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.53■□□□□ 0.72
RAB28P51157 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB28P51157 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.52■□□□□ 0.72
RAB28P51157 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.52■□□□□ 0.72
RAB28P51157 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB28P51157 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB28P51157 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB28P51157 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB28P51157 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
RAB28P51157 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB28P51157 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB28P51157 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.52■□□□□ 0.72
RAB28P51157 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB28P51157 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB28P51157 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.52■□□□□ 0.72
RAB28P51157 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.52■□□□□ 0.72
RAB28P51157 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
RAB28P51157 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.52■□□□□ 0.72
RAB28P51157 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.52■□□□□ 0.72
RAB28P51157 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.52■□□□□ 0.72
RAB28P51157 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
RAB28P51157 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB28P51157 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
RAB28P51157 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB28P51157 AC092368.3-202ENST00000574180 1591 ntBASIC19.52■□□□□ 0.71
RAB28P51157 AC073314.1-201ENST00000568729 2216 ntBASIC19.52■□□□□ 0.71
RAB28P51157 DPP3P2-201ENST00000416030 1696 ntBASIC19.52■□□□□ 0.71
RAB28P51157 FEM1AP1-201ENST00000431297 1995 ntBASIC19.52■□□□□ 0.71
RAB28P51157 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
RAB28P51157 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB28P51157 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RAB28P51157 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.51■□□□□ 0.71
RAB28P51157 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.51■□□□□ 0.71
RAB28P51157 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB28P51157 AC020907.5-201ENST00000624372 1936 ntBASIC19.51■□□□□ 0.71
RAB28P51157 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB28P51157 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB28P51157 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB28P51157 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.51■□□□□ 0.71
RAB28P51157 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.51■□□□□ 0.71
RAB28P51157 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB28P51157 AC023632.3-201ENST00000521633 145 ntBASIC19.51■□□□□ 0.71
RAB28P51157 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.51■□□□□ 0.71
RAB28P51157 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RAB28P51157 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.51■□□□□ 0.71
RAB28P51157 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RAB28P51157 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB28P51157 AP005212.1-201ENST00000581547 1997 ntBASIC19.51■□□□□ 0.71
RAB28P51157 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB28P51157 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB28P51157 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB28P51157 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RAB28P51157 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.51■□□□□ 0.71
RAB28P51157 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB28P51157 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.51■□□□□ 0.71
RAB28P51157 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB28P51157 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB28P51157 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB28P51157 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB28P51157 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.5■□□□□ 0.71
RAB28P51157 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.5■□□□□ 0.71
RAB28P51157 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
RAB28P51157 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB28P51157 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB28P51157 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.5■□□□□ 0.71
RAB28P51157 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB28P51157 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
RAB28P51157 PNMA6B-201ENST00000538162 1200 ntBASIC19.5■□□□□ 0.71
RAB28P51157 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.5■□□□□ 0.71
RAB28P51157 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.5■□□□□ 0.71
RAB28P51157 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.5■□□□□ 0.71
RAB28P51157 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB28P51157 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.5■□□□□ 0.71
RAB28P51157 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB28P51157 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB28P51157 PTBP1P-201ENST00000554374 1601 ntBASIC19.5■□□□□ 0.71
RAB28P51157 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB28P51157 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB28P51157 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RAB28P51157 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB28P51157 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB28P51157 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB28P51157 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms