Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.27■■□□□ 1
TUBP50607 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TUBP50607 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
TUBP50607 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.27■■□□□ 1
TUBP50607 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.27■■□□□ 1
TUBP50607 AC026366.1-201ENST00000488803 879 ntBASIC21.27■■□□□ 1
TUBP50607 AP003097.1-201ENST00000530657 1135 ntBASIC21.27■■□□□ 1
TUBP50607 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TUBP50607 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.27■■□□□ 1
TUBP50607 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.27■■□□□ 1
TUBP50607 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
TUBP50607 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
TUBP50607 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TUBP50607 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TUBP50607 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TUBP50607 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.26■□□□□ 0.99
TUBP50607 AC027702.1-201ENST00000563810 1770 ntBASIC21.26■□□□□ 0.99
TUBP50607 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TUBP50607 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.26■□□□□ 0.99
TUBP50607 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TUBP50607 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TUBP50607 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
TUBP50607 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.26■□□□□ 0.99
TUBP50607 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TUBP50607 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TUBP50607 PNMA6B-201ENST00000538162 1200 ntBASIC21.26■□□□□ 0.99
TUBP50607 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.26■□□□□ 0.99
TUBP50607 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TUBP50607 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.26■□□□□ 0.99
TUBP50607 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TUBP50607 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TUBP50607 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TUBP50607 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TUBP50607 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.26■□□□□ 0.99
TUBP50607 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.26■□□□□ 0.99
TUBP50607 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TUBP50607 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
TUBP50607 PLK5-205ENST00000642079 1969 ntBASIC21.25■□□□□ 0.99
TUBP50607 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TUBP50607 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.25■□□□□ 0.99
TUBP50607 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TUBP50607 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TUBP50607 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TUBP50607 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.25■□□□□ 0.99
TUBP50607 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TUBP50607 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.25■□□□□ 0.99
TUBP50607 AC092368.3-202ENST00000574180 1591 ntBASIC21.25■□□□□ 0.99
TUBP50607 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
TUBP50607 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.25■□□□□ 0.99
TUBP50607 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TUBP50607 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TUBP50607 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TUBP50607 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TUBP50607 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.25■□□□□ 0.99
TUBP50607 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.25■□□□□ 0.99
TUBP50607 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
TUBP50607 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
TUBP50607 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TUBP50607 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
TUBP50607 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TUBP50607 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
TUBP50607 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TUBP50607 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TUBP50607 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TUBP50607 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
TUBP50607 KRT18P29-201ENST00000397031 1267 ntBASIC21.24■□□□□ 0.99
TUBP50607 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.24■□□□□ 0.99
TUBP50607 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
TUBP50607 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TUBP50607 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TUBP50607 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
TUBP50607 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.24■□□□□ 0.99
TUBP50607 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
TUBP50607 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TUBP50607 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
TUBP50607 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
TUBP50607 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TUBP50607 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TUBP50607 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TUBP50607 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TUBP50607 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TUBP50607 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TUBP50607 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TUBP50607 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
TUBP50607 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TUBP50607 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
TUBP50607 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TUBP50607 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
TUBP50607 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.23■□□□□ 0.99
TUBP50607 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TUBP50607 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TUBP50607 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.23■□□□□ 0.99
TUBP50607 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TUBP50607 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TUBP50607 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.23■□□□□ 0.99
TUBP50607 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TUBP50607 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TUBP50607 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
TUBP50607 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.22■□□□□ 0.99
TUBP50607 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms