Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MMP13P45452 AC007322.3-201ENST00000426526 701 ntBASIC21■□□□□ 0.95
MMP13P45452 CDV3P1-201ENST00000471403 739 ntBASIC21■□□□□ 0.95
MMP13P45452 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21■□□□□ 0.95
MMP13P45452 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
MMP13P45452 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21■□□□□ 0.95
MMP13P45452 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MMP13P45452 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MMP13P45452 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21■□□□□ 0.95
MMP13P45452 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21■□□□□ 0.95
MMP13P45452 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MMP13P45452 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21■□□□□ 0.95
MMP13P45452 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MMP13P45452 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MMP13P45452 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
MMP13P45452 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21■□□□□ 0.95
MMP13P45452 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21■□□□□ 0.95
MMP13P45452 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21■□□□□ 0.95
MMP13P45452 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
MMP13P45452 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
MMP13P45452 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MMP13P45452 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MMP13P45452 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MMP13P45452 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MMP13P45452 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MMP13P45452 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
MMP13P45452 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MMP13P45452 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MMP13P45452 AC007322.1-201ENST00000426983 750 ntBASIC20.99■□□□□ 0.95
MMP13P45452 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.99■□□□□ 0.95
MMP13P45452 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.99■□□□□ 0.95
MMP13P45452 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
MMP13P45452 AC073111.5-205ENST00000641717 521 ntBASIC20.99■□□□□ 0.95
MMP13P45452 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MMP13P45452 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MMP13P45452 AC099778.1-201ENST00000568593 1911 ntBASIC20.99■□□□□ 0.95
MMP13P45452 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MMP13P45452 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
MMP13P45452 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MMP13P45452 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MMP13P45452 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MMP13P45452 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
MMP13P45452 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.98■□□□□ 0.95
MMP13P45452 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.98■□□□□ 0.95
MMP13P45452 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MMP13P45452 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
MMP13P45452 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
MMP13P45452 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
MMP13P45452 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.98■□□□□ 0.95
MMP13P45452 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MMP13P45452 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MMP13P45452 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
MMP13P45452 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.98■□□□□ 0.95
MMP13P45452 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
MMP13P45452 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
MMP13P45452 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MMP13P45452 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
MMP13P45452 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
MMP13P45452 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MMP13P45452 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MMP13P45452 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MMP13P45452 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MMP13P45452 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
MMP13P45452 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MMP13P45452 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.97■□□□□ 0.95
MMP13P45452 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
MMP13P45452 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
MMP13P45452 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
MMP13P45452 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.97■□□□□ 0.95
MMP13P45452 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.97■□□□□ 0.95
MMP13P45452 AL162412.1-201ENST00000567129 965 ntBASIC20.97■□□□□ 0.95
MMP13P45452 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.97■□□□□ 0.95
MMP13P45452 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.97■□□□□ 0.95
MMP13P45452 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
MMP13P45452 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
MMP13P45452 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.97■□□□□ 0.95
MMP13P45452 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
MMP13P45452 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MMP13P45452 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MMP13P45452 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
MMP13P45452 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
MMP13P45452 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
MMP13P45452 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MMP13P45452 AC068338.2-201ENST00000563278 1430 ntBASIC20.96■□□□□ 0.95
MMP13P45452 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
MMP13P45452 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MMP13P45452 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MMP13P45452 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
MMP13P45452 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.96■□□□□ 0.95
MMP13P45452 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
MMP13P45452 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
MMP13P45452 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.96■□□□□ 0.95
MMP13P45452 CDCA4P2-201ENST00000441182 718 ntBASIC20.96■□□□□ 0.95
MMP13P45452 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.96■□□□□ 0.95
MMP13P45452 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.96■□□□□ 0.95
MMP13P45452 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.96■□□□□ 0.95
MMP13P45452 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
MMP13P45452 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.96■□□□□ 0.95
MMP13P45452 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MMP13P45452 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms