Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.43■□□□□ 0.86
CHRNA4P43681 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
CHRNA4P43681 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.43■□□□□ 0.86
CHRNA4P43681 AC105020.6-201ENST00000621523 1217 ntBASIC20.43■□□□□ 0.86
CHRNA4P43681 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.43■□□□□ 0.86
CHRNA4P43681 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
CHRNA4P43681 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHRNA4P43681 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHRNA4P43681 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHRNA4P43681 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.42■□□□□ 0.86
CHRNA4P43681 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHRNA4P43681 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHRNA4P43681 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.42■□□□□ 0.86
CHRNA4P43681 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.42■□□□□ 0.86
CHRNA4P43681 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.42■□□□□ 0.86
CHRNA4P43681 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHRNA4P43681 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHRNA4P43681 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHRNA4P43681 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.42■□□□□ 0.86
CHRNA4P43681 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CHRNA4P43681 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.42■□□□□ 0.86
CHRNA4P43681 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CHRNA4P43681 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.42■□□□□ 0.86
CHRNA4P43681 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.42■□□□□ 0.86
CHRNA4P43681 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.42■□□□□ 0.86
CHRNA4P43681 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.42■□□□□ 0.86
CHRNA4P43681 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CHRNA4P43681 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHRNA4P43681 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHRNA4P43681 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHRNA4P43681 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHRNA4P43681 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.42■□□□□ 0.86
CHRNA4P43681 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.42■□□□□ 0.86
CHRNA4P43681 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHRNA4P43681 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.41■□□□□ 0.86
CHRNA4P43681 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHRNA4P43681 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHRNA4P43681 AC083906.2-201ENST00000511578 360 ntBASIC20.41■□□□□ 0.86
CHRNA4P43681 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHRNA4P43681 MKRN4P-201ENST00000444706 1521 ntBASIC20.41■□□□□ 0.86
CHRNA4P43681 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
CHRNA4P43681 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
CHRNA4P43681 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.41■□□□□ 0.86
CHRNA4P43681 AC099778.1-201ENST00000568593 1911 ntBASIC20.41■□□□□ 0.86
CHRNA4P43681 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CHRNA4P43681 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHRNA4P43681 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHRNA4P43681 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHRNA4P43681 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.41■□□□□ 0.86
CHRNA4P43681 SLC25A24-204ENST00000569674 2357 ntBASIC20.41■□□□□ 0.86
CHRNA4P43681 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHRNA4P43681 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHRNA4P43681 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHRNA4P43681 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CHRNA4P43681 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHRNA4P43681 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHRNA4P43681 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
CHRNA4P43681 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.4■□□□□ 0.86
CHRNA4P43681 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.4■□□□□ 0.86
CHRNA4P43681 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHRNA4P43681 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.4■□□□□ 0.86
CHRNA4P43681 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.4■□□□□ 0.86
CHRNA4P43681 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.4■□□□□ 0.86
CHRNA4P43681 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.4■□□□□ 0.86
CHRNA4P43681 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.4■□□□□ 0.86
CHRNA4P43681 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.4■□□□□ 0.86
CHRNA4P43681 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.4■□□□□ 0.86
CHRNA4P43681 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.4■□□□□ 0.86
CHRNA4P43681 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CHRNA4P43681 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHRNA4P43681 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CHRNA4P43681 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHRNA4P43681 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.39■□□□□ 0.86
CHRNA4P43681 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CHRNA4P43681 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CHRNA4P43681 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHRNA4P43681 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
CHRNA4P43681 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.39■□□□□ 0.86
CHRNA4P43681 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHRNA4P43681 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHRNA4P43681 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.39■□□□□ 0.85
CHRNA4P43681 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHRNA4P43681 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.39■□□□□ 0.85
CHRNA4P43681 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.39■□□□□ 0.85
CHRNA4P43681 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.39■□□□□ 0.85
CHRNA4P43681 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.39■□□□□ 0.85
CHRNA4P43681 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.39■□□□□ 0.85
CHRNA4P43681 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.39■□□□□ 0.85
CHRNA4P43681 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.39■□□□□ 0.85
CHRNA4P43681 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.39■□□□□ 0.85
CHRNA4P43681 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHRNA4P43681 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.39■□□□□ 0.85
CHRNA4P43681 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHRNA4P43681 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHRNA4P43681 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.39■□□□□ 0.85
CHRNA4P43681 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CHRNA4P43681 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CHRNA4P43681 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHRNA4P43681 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHRNA4P43681 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms