Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.94■■□□□ 1.1
USP8P40818 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
USP8P40818 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
USP8P40818 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
USP8P40818 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
USP8P40818 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
USP8P40818 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
USP8P40818 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.93■■□□□ 1.1
USP8P40818 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.93■■□□□ 1.1
USP8P40818 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
USP8P40818 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
USP8P40818 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
USP8P40818 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.93■■□□□ 1.1
USP8P40818 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
USP8P40818 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.93■■□□□ 1.1
USP8P40818 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.93■■□□□ 1.1
USP8P40818 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.93■■□□□ 1.1
USP8P40818 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
USP8P40818 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
USP8P40818 AL591742.1-201ENST00000604433 565 ntBASIC21.93■■□□□ 1.1
USP8P40818 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.93■■□□□ 1.1
USP8P40818 MIR2861-201ENST00000636310 90 ntBASIC21.93■■□□□ 1.1
USP8P40818 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
USP8P40818 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
USP8P40818 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.92■■□□□ 1.1
USP8P40818 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
USP8P40818 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
USP8P40818 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
USP8P40818 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
USP8P40818 PCDHAC2-203ENST00000615316 3011 ntBASIC21.92■■□□□ 1.1
USP8P40818 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
USP8P40818 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.92■■□□□ 1.1
USP8P40818 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.92■■□□□ 1.1
USP8P40818 AC022517.1-201ENST00000592429 346 ntBASIC21.92■■□□□ 1.1
USP8P40818 AC013268.1-206ENST00000638368 961 ntBASIC21.92■■□□□ 1.1
USP8P40818 AC112229.1-201ENST00000639295 961 ntBASIC21.92■■□□□ 1.1
USP8P40818 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.92■■□□□ 1.1
USP8P40818 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.92■■□□□ 1.1
USP8P40818 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.92■■□□□ 1.1
USP8P40818 AC138932.1-201ENST00000534164 6830 ntBASIC21.92■■□□□ 1.1
USP8P40818 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
USP8P40818 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.91■■□□□ 1.1
USP8P40818 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
USP8P40818 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
USP8P40818 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
USP8P40818 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
USP8P40818 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.91■■□□□ 1.1
USP8P40818 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
USP8P40818 AC006015.1-201ENST00000429970 570 ntBASIC21.91■■□□□ 1.1
USP8P40818 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.91■■□□□ 1.1
USP8P40818 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
USP8P40818 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
USP8P40818 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
USP8P40818 AC092720.2-201ENST00000602388 1665 ntBASIC21.91■■□□□ 1.1
USP8P40818 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
USP8P40818 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
USP8P40818 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
USP8P40818 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
USP8P40818 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
USP8P40818 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.9■■□□□ 1.1
USP8P40818 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
USP8P40818 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.9■■□□□ 1.1
USP8P40818 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.9■■□□□ 1.1
USP8P40818 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
USP8P40818 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.9■■□□□ 1.1
USP8P40818 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
USP8P40818 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
USP8P40818 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.9■■□□□ 1.1
USP8P40818 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.9■■□□□ 1.1
USP8P40818 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.9■■□□□ 1.1
USP8P40818 BID-214ENST00000617586 542 ntTSL 5 BASIC21.9■■□□□ 1.1
USP8P40818 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
USP8P40818 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
USP8P40818 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
USP8P40818 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
USP8P40818 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
USP8P40818 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
USP8P40818 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.89■■□□□ 1.1
USP8P40818 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
USP8P40818 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.89■■□□□ 1.1
USP8P40818 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.89■■□□□ 1.1
USP8P40818 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.89■■□□□ 1.09
USP8P40818 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
USP8P40818 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
USP8P40818 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.89■■□□□ 1.09
USP8P40818 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.89■■□□□ 1.09
USP8P40818 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.89■■□□□ 1.09
USP8P40818 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
USP8P40818 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
USP8P40818 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
USP8P40818 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
USP8P40818 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
USP8P40818 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
USP8P40818 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.88■■□□□ 1.09
USP8P40818 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
USP8P40818 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
USP8P40818 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
USP8P40818 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
USP8P40818 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.88■■□□□ 1.09
USP8P40818 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms