Protein–RNA interactions for Protein: P40016

RPN3, 26S proteasome regulatory subunit RPN3, yeastyeast

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN3P40016 SMD1YGR074W 441 nt2.88□□□□□ -1.95
RPN3P40016 RRT15YLR162W-A 189 nt2.88□□□□□ -1.95
RPN3P40016 TOR1YJR066W 7413 nt2.88□□□□□ -1.95
RPN3P40016 SSQ1YLR369W 1974 nt2.88□□□□□ -1.95
RPN3P40016 EFR3YMR212C 2349 nt2.88□□□□□ -1.95
RPN3P40016 AXL1YPR122W 3627 nt2.87□□□□□ -1.95
RPN3P40016 BUB1YGR188C 3066 nt2.87□□□□□ -1.95
RPN3P40016 HRD3YLR207W 2502 nt2.87□□□□□ -1.95
RPN3P40016 NOP10YHR072W-A 177 nt2.87□□□□□ -1.95
RPN3P40016 YIL174WYIL174W 228 nt2.87□□□□□ -1.95
RPN3P40016 YJL222W-AYJL222W-A 228 nt2.87□□□□□ -1.95
RPN3P40016 YLR149CYLR149C 2193 nt2.87□□□□□ -1.95
RPN3P40016 VPH1YOR270C 2523 nt2.86□□□□□ -1.95
RPN3P40016 PRP6YBR055C 2700 nt2.86□□□□□ -1.95
RPN3P40016 PRP8YHR165C 7242 nt2.86□□□□□ -1.95
RPN3P40016 VPS34YLR240W 2628 nt2.86□□□□□ -1.95
RPN3P40016 SPT21YMR179W 2277 nt2.85□□□□□ -1.95
RPN3P40016 BCK1YJL095W 4437 nt2.85□□□□□ -1.95
RPN3P40016 YGL217CYGL217C 342 nt2.85□□□□□ -1.95
RPN3P40016 YPR092WYPR092W 306 nt2.85□□□□□ -1.95
RPN3P40016 SLH1YGR271W 5904 nt2.85□□□□□ -1.95
RPN3P40016 PLC1YPL268W 2610 nt2.85□□□□□ -1.95
RPN3P40016 NAB6YML117W 3405 nt2.84□□□□□ -1.95
RPN3P40016 COS111YBR203W 2775 nt2.84□□□□□ -1.95
RPN3P40016 SEF1YBL066C 3447 nt2.84□□□□□ -1.95
RPN3P40016 YHR032W-AYHR032W-A 180 nt2.84□□□□□ -1.95
RPN3P40016 RPS22AYJL190C 393 nt2.84□□□□□ -1.95
RPN3P40016 SMC2YFR031C 3513 nt2.84□□□□□ -1.95
RPN3P40016 SEC5YDR166C 2916 nt2.84□□□□□ -1.96
RPN3P40016 NEW1YPL226W 3591 nt2.84□□□□□ -1.96
RPN3P40016 GRR1YJR090C 3456 nt2.83□□□□□ -1.96
RPN3P40016 VPS54YDR027C 2670 nt2.83□□□□□ -1.96
RPN3P40016 MRP10YDL045W-A 288 nt2.83□□□□□ -1.96
RPN3P40016 YDR286CYDR286C 345 nt2.83□□□□□ -1.96
RPN3P40016 YAL042C-AYAL042C-A 378 nt2.83□□□□□ -1.96
RPN3P40016 snR43snR43 209 nt2.83□□□□□ -1.96
RPN3P40016 RPO41YFL036W 4056 nt2.83□□□□□ -1.96
RPN3P40016 RSN1YMR266W 2862 nt2.82□□□□□ -1.96
RPN3P40016 snR74snR74 88 nt2.82□□□□□ -1.96
RPN3P40016 FMP16YDR070C 282 nt2.82□□□□□ -1.96
RPN3P40016 PNC1YGL037C 651 nt2.82□□□□□ -1.96
RPN3P40016 YIL020C-AYIL020C-A 339 nt2.82□□□□□ -1.96
RPN3P40016 YBR182C-AYBR182C-A 195 nt2.82□□□□□ -1.96
RPN3P40016 YBR184WYBR184W 1572 nt2.82□□□□□ -1.96
RPN3P40016 DBP7YKR024C 2229 nt2.81□□□□□ -1.96
RPN3P40016 PXA2YKL188C 2562 nt2.81□□□□□ -1.96
RPN3P40016 snR85snR85 171 nt2.81□□□□□ -1.96
RPN3P40016 YNL097C-BYNL097C-B 123 nt2.81□□□□□ -1.96
RPN3P40016 YOR376WYOR376W 369 nt2.81□□□□□ -1.96
RPN3P40016 YBR131C-AYBR131C-A 90 nt2.81□□□□□ -1.96
RPN3P40016 PDR3YBL005W 2931 nt2.81□□□□□ -1.96
RPN3P40016 TAE2YPL009C 3117 nt2.81□□□□□ -1.96
RPN3P40016 SEC26YDR238C 2922 nt2.8□□□□□ -1.96
RPN3P40016 ESL1YIL151C 3357 nt2.8□□□□□ -1.96
RPN3P40016 IKI3YLR384C 4050 nt2.79□□□□□ -1.96
RPN3P40016 PTP3YER075C 2787 nt2.79□□□□□ -1.96
RPN3P40016 PEP3YLR148W 2757 nt2.79□□□□□ -1.96
RPN3P40016 NUM1YDR150W 8247 nt2.79□□□□□ -1.96
RPN3P40016 DUG2YBR281C 2637 nt2.79□□□□□ -1.96
RPN3P40016 SWR1YDR334W 4545 nt2.79□□□□□ -1.96
RPN3P40016 YGR164WYGR164W 336 nt2.79□□□□□ -1.96
RPN3P40016 INP2YMR163C 2118 nt2.79□□□□□ -1.96
RPN3P40016 YBL083CYBL083C 426 nt2.79□□□□□ -1.96
RPN3P40016 SMY1YKL079W 1971 nt2.79□□□□□ -1.96
RPN3P40016 FRE2YKL220C 2136 nt2.78□□□□□ -1.96
RPN3P40016 SNF5YBR289W 2718 nt2.78□□□□□ -1.96
RPN3P40016 MUK1YPL070W 1839 nt2.78□□□□□ -1.96
RPN3P40016 YLR146W-AYLR146W-A 189 nt2.78□□□□□ -1.96
RPN3P40016 RPL20AYMR242C 519 nt2.78□□□□□ -1.96
RPN3P40016 snR52snR52 92 nt2.78□□□□□ -1.96
RPN3P40016 RTT10YPL183C 3042 nt2.78□□□□□ -1.96
RPN3P40016 YIL080WYIL080W 4722 nt2.78□□□□□ -1.96
RPN3P40016 YDR186CYDR186C 2634 nt2.77□□□□□ -1.97
RPN3P40016 RPL42BYHR141C 321 nt2.77□□□□□ -1.97
RPN3P40016 EMC6YLL014W 327 nt2.77□□□□□ -1.97
RPN3P40016 RPL42AYNL162W 321 nt2.77□□□□□ -1.97
RPN3P40016 YBR277CYBR277C 402 nt2.77□□□□□ -1.97
RPN3P40016 snR48snR48 113 nt2.77□□□□□ -1.97
RPN3P40016 SUL1YBR294W 2580 nt2.77□□□□□ -1.97
RPN3P40016 FIR1YER032W 2631 nt2.76□□□□□ -1.97
RPN3P40016 VMR1YHL035C 4779 nt2.76□□□□□ -1.97
RPN3P40016 PFF1YBR074W 2931 nt2.76□□□□□ -1.97
RPN3P40016 YIR030W-AYIR030W-A 384 nt2.76□□□□□ -1.97
RPN3P40016 PSK1YAL017W 4071 nt2.76□□□□□ -1.97
RPN3P40016 MPT5YGL178W 2580 nt2.76□□□□□ -1.97
RPN3P40016 SWA2YDR320C 2007 nt2.76□□□□□ -1.97
RPN3P40016 LRE1YCL051W 1752 nt2.75□□□□□ -1.97
RPN3P40016 VPS16YPL045W 2397 nt2.75□□□□□ -1.97
RPN3P40016 RIC1YLR039C 3171 nt2.75□□□□□ -1.97
RPN3P40016 INP52YNL106C 3552 nt2.75□□□□□ -1.97
RPN3P40016 STB4YMR019W 2850 nt2.75□□□□□ -1.97
RPN3P40016 PDR1YGL013C 3207 nt2.74□□□□□ -1.97
RPN3P40016 snR72snR72 98 nt2.74□□□□□ -1.97
RPN3P40016 ACB1YGR037C 264 nt2.74□□□□□ -1.97
RPN3P40016 SNC1YAL030W 354 nt2.74□□□□□ -1.97
RPN3P40016 COF1YLL050C 432 nt2.74□□□□□ -1.97
RPN3P40016 YNL114CYNL114C 372 nt2.74□□□□□ -1.97
RPN3P40016 RPB10YOR210W 213 nt2.74□□□□□ -1.97
RPN3P40016 snR46snR46 197 nt2.74□□□□□ -1.97
RPN3P40016 GCV2YMR189W 3105 nt2.74□□□□□ -1.97
Retrieved 100 of 7,029 protein–RNA pairs in 18 ms