Protein–RNA interactions for Protein: P39702

VPS8, Vacuolar protein sorting-associated protein 8, yeastyeast

Predictions only

Length 1,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS8P39702 YDR169C-AYDR169C-A 150 nt2.37□□□□□ -2.03
VPS8P39702 NOP10YHR072W-A 177 nt2.37□□□□□ -2.03
VPS8P39702 YOR072W-AYOR072W-A 249 nt2.37□□□□□ -2.03
VPS8P39702 GIP3YPL137C 3831 nt2.37□□□□□ -2.03
VPS8P39702 IST2YBR086C 2841 nt2.37□□□□□ -2.03
VPS8P39702 GYP5YPL249C 2685 nt2.37□□□□□ -2.03
VPS8P39702 NOT5YPR072W 1683 nt2.37□□□□□ -2.03
VPS8P39702 CRM1YGR218W 3255 nt2.37□□□□□ -2.03
VPS8P39702 DGR1YNL130C-A 147 nt2.36□□□□□ -2.03
VPS8P39702 NEO1YIL048W 3456 nt2.36□□□□□ -2.03
VPS8P39702 BRE1YDL074C 2103 nt2.36□□□□□ -2.03
VPS8P39702 TRL1YJL087C 2484 nt2.35□□□□□ -2.03
VPS8P39702 RTT101YJL047C 2529 nt2.35□□□□□ -2.03
VPS8P39702 MCD1YDL003W 1701 nt2.35□□□□□ -2.03
VPS8P39702 YDR183C-AYDR183C-A 258 nt2.35□□□□□ -2.03
VPS8P39702 YDR366CYDR366C 399 nt2.35□□□□□ -2.03
VPS8P39702 YOR333CYOR333C 417 nt2.35□□□□□ -2.03
VPS8P39702 MF(ALPHA)1YPL187W 498 nt2.35□□□□□ -2.03
VPS8P39702 SGO1YOR073W 1773 nt2.35□□□□□ -2.03
VPS8P39702 SMD1YGR074W 441 nt2.34□□□□□ -2.03
VPS8P39702 YMR158W-BYMR158W-B 321 nt2.34□□□□□ -2.03
VPS8P39702 YPR099CYPR099C 357 nt2.34□□□□□ -2.03
VPS8P39702 SMY1YKL079W 1971 nt2.34□□□□□ -2.04
VPS8P39702 MNE1YOR350C 1992 nt2.34□□□□□ -2.04
VPS8P39702 YIL059CYIL059C 366 nt2.33□□□□□ -2.04
VPS8P39702 YLR255CYLR255C 354 nt2.33□□□□□ -2.04
VPS8P39702 RPL32YBL092W 393 nt2.33□□□□□ -2.04
VPS8P39702 RIC1YLR039C 3171 nt2.33□□□□□ -2.04
VPS8P39702 RTT107YHR154W 3213 nt2.33□□□□□ -2.04
VPS8P39702 CDC60YPL160W 3273 nt2.33□□□□□ -2.04
VPS8P39702 DFG16YOR030W 1860 nt2.33□□□□□ -2.04
VPS8P39702 TOF2YKR010C 2316 nt2.33□□□□□ -2.04
VPS8P39702 DIS3YOL021C 3006 nt2.32□□□□□ -2.04
VPS8P39702 YGL149WYGL149W 306 nt2.32□□□□□ -2.04
VPS8P39702 PHS1YJL097W 654 nt2.32□□□□□ -2.04
VPS8P39702 YKL165C-AYKL165C-A 234 nt2.32□□□□□ -2.04
VPS8P39702 VPS35YJL154C 2835 nt2.32□□□□□ -2.04
VPS8P39702 PAC1YOR269W 1485 nt2.32□□□□□ -2.04
VPS8P39702 TOF1YNL273W 3717 nt2.31□□□□□ -2.04
VPS8P39702 HMRA2YCR096C 360 nt2.31□□□□□ -2.04
VPS8P39702 YHR180W-AYHR180W-A 183 nt2.31□□□□□ -2.04
VPS8P39702 GRR1YJR090C 3456 nt2.31□□□□□ -2.04
VPS8P39702 YBR184WYBR184W 1572 nt2.31□□□□□ -2.04
VPS8P39702 PAN3YKL025C 2040 nt2.3□□□□□ -2.04
VPS8P39702 VMR1YHL035C 4779 nt2.3□□□□□ -2.04
VPS8P39702 YFL063WYFL063W 456 nt2.3□□□□□ -2.04
VPS8P39702 YHR007C-AYHR007C-A 216 nt2.3□□□□□ -2.04
VPS8P39702 TAR1YLR154W-C 375 nt2.3□□□□□ -2.04
VPS8P39702 RGA1YOR127W 3024 nt2.3□□□□□ -2.04
VPS8P39702 LYS9YNR050C 1341 nt2.29□□□□□ -2.04
VPS8P39702 RPL35AYDL191W 363 nt2.29□□□□□ -2.04
VPS8P39702 snR8snR8 190 nt2.29□□□□□ -2.04
VPS8P39702 YMR290W-AYMR290W-A 348 nt2.29□□□□□ -2.04
VPS8P39702 snR51snR51 107 nt2.29□□□□□ -2.04
VPS8P39702 TOR2YKL203C 7425 nt2.28□□□□□ -2.04
VPS8P39702 YDR286CYDR286C 345 nt2.28□□□□□ -2.04
VPS8P39702 YER172C-AYER172C-A 381 nt2.28□□□□□ -2.04
VPS8P39702 MNL2YLR057W 2550 nt2.28□□□□□ -2.04
VPS8P39702 CSN9YDR179C 489 nt2.27□□□□□ -2.05
VPS8P39702 YGL069CYGL069C 465 nt2.27□□□□□ -2.05
VPS8P39702 YKR075W-AYKR075W-A 270 nt2.27□□□□□ -2.05
VPS8P39702 HTB2YBL002W 396 nt2.27□□□□□ -2.05
VPS8P39702 YPR010C-AYPR010C-A 219 nt2.27□□□□□ -2.05
VPS8P39702 YBR224WYBR224W 516 nt2.27□□□□□ -2.05
VPS8P39702 PEX8YGR077C 1770 nt2.27□□□□□ -2.05
VPS8P39702 VPS8YAL002W 3825 nt2.27□□□□□ -2.05
VPS8P39702 PEP3YLR148W 2757 nt2.27□□□□□ -2.05
VPS8P39702 SPO22YIL073C 2928 nt2.26□□□□□ -2.05
VPS8P39702 FKS1YLR342W 5631 nt2.26□□□□□ -2.05
VPS8P39702 COS111YBR203W 2775 nt2.26□□□□□ -2.05
VPS8P39702 YDR048CYDR048C 315 nt2.26□□□□□ -2.05
VPS8P39702 YHR063W-AYHR063W-A 336 nt2.26□□□□□ -2.05
VPS8P39702 OST1YJL002C 1431 nt2.25□□□□□ -2.05
VPS8P39702 CDC27YBL084C 2277 nt2.25□□□□□ -2.05
VPS8P39702 SEF1YBL066C 3447 nt2.25□□□□□ -2.05
VPS8P39702 SCH9YHR205W 2475 nt2.25□□□□□ -2.05
VPS8P39702 YDL118WYDL118W 381 nt2.25□□□□□ -2.05
VPS8P39702 YHL041WYHL041W 450 nt2.25□□□□□ -2.05
VPS8P39702 YLR149CYLR149C 2193 nt2.25□□□□□ -2.05
VPS8P39702 PET309YLR067C 2898 nt2.24□□□□□ -2.05
VPS8P39702 MGM1YOR211C 2646 nt2.24□□□□□ -2.05
VPS8P39702 SPP41YDR464W 4308 nt2.24□□□□□ -2.05
VPS8P39702 YDR341CYDR341C 1824 nt2.24□□□□□ -2.05
VPS8P39702 HER1YOR227W 3741 nt2.24□□□□□ -2.05
VPS8P39702 HOP2YGL033W 657 nt2.24□□□□□ -2.05
VPS8P39702 YLR053CYLR053C 327 nt2.24□□□□□ -2.05
VPS8P39702 SAR1YPL218W 573 nt2.24□□□□□ -2.05
VPS8P39702 RIM20YOR275C 1986 nt2.23□□□□□ -2.05
VPS8P39702 BUD2YKL092C 3315 nt2.23□□□□□ -2.05
VPS8P39702 NAM7YMR080C 2916 nt2.23□□□□□ -2.05
VPS8P39702 EFR3YMR212C 2349 nt2.23□□□□□ -2.05
VPS8P39702 CAT2YML042W 2013 nt2.22□□□□□ -2.05
VPS8P39702 RPA34YJL148W 702 nt2.22□□□□□ -2.05
VPS8P39702 HHT1YBR010W 411 nt2.22□□□□□ -2.05
VPS8P39702 SYH1YPL105C 2550 nt2.22□□□□□ -2.05
VPS8P39702 HDA3YPR179C 1968 nt2.21□□□□□ -2.05
VPS8P39702 OSH6YKR003W 1347 nt2.21□□□□□ -2.06
VPS8P39702 STB4YMR019W 2850 nt2.21□□□□□ -2.06
VPS8P39702 RPL37BYDR500C 267 nt2.21□□□□□ -2.06
VPS8P39702 YJL015CYJL015C 285 nt2.21□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 20.3 ms