Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
COL15A1P39059 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
COL15A1P39059 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
COL15A1P39059 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
COL15A1P39059 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
COL15A1P39059 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC25.82■■□□□ 1.72
COL15A1P39059 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC25.82■■□□□ 1.72
COL15A1P39059 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
COL15A1P39059 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
COL15A1P39059 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.82■■□□□ 1.72
COL15A1P39059 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
COL15A1P39059 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
COL15A1P39059 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC25.82■■□□□ 1.72
COL15A1P39059 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC25.82■■□□□ 1.72
COL15A1P39059 PPOX-219ENST00000544598 813 ntTSL 2 BASIC25.82■■□□□ 1.72
COL15A1P39059 GRAP-204ENST00000573099 846 ntTSL 3 BASIC25.82■■□□□ 1.72
COL15A1P39059 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
COL15A1P39059 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
COL15A1P39059 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
COL15A1P39059 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
COL15A1P39059 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC25.81■■□□□ 1.72
COL15A1P39059 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
COL15A1P39059 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
COL15A1P39059 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
COL15A1P39059 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
COL15A1P39059 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
COL15A1P39059 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC25.8■■□□□ 1.72
COL15A1P39059 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
COL15A1P39059 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
COL15A1P39059 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
COL15A1P39059 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
COL15A1P39059 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC25.8■■□□□ 1.72
COL15A1P39059 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC25.8■■□□□ 1.72
COL15A1P39059 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC25.8■■□□□ 1.72
COL15A1P39059 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC25.8■■□□□ 1.72
COL15A1P39059 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC25.8■■□□□ 1.72
COL15A1P39059 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
COL15A1P39059 AC026471.5-201ENST00000615068 467 ntBASIC25.8■■□□□ 1.72
COL15A1P39059 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
COL15A1P39059 LINC00565-201ENST00000562710 2331 ntBASIC25.8■■□□□ 1.72
COL15A1P39059 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
COL15A1P39059 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
COL15A1P39059 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
COL15A1P39059 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
COL15A1P39059 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
COL15A1P39059 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
COL15A1P39059 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
COL15A1P39059 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC25.79■■□□□ 1.72
COL15A1P39059 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
COL15A1P39059 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
COL15A1P39059 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC25.79■■□□□ 1.72
COL15A1P39059 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC25.79■■□□□ 1.72
COL15A1P39059 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC25.79■■□□□ 1.72
COL15A1P39059 AL353708.3-201ENST00000610272 989 ntBASIC25.79■■□□□ 1.72
COL15A1P39059 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC25.79■■□□□ 1.72
COL15A1P39059 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
COL15A1P39059 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC25.79■■□□□ 1.72
COL15A1P39059 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC25.79■■□□□ 1.72
COL15A1P39059 STK25-205ENST00000405883 1904 ntTSL 2 BASIC25.78■■□□□ 1.72
COL15A1P39059 PALM-207ENST00000590161 2137 ntTSL 4 BASIC25.78■■□□□ 1.72
COL15A1P39059 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
COL15A1P39059 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
COL15A1P39059 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
COL15A1P39059 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
COL15A1P39059 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC25.78■■□□□ 1.72
COL15A1P39059 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC25.78■■□□□ 1.72
COL15A1P39059 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
COL15A1P39059 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
COL15A1P39059 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC25.78■■□□□ 1.72
COL15A1P39059 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC25.78■■□□□ 1.72
COL15A1P39059 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
COL15A1P39059 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
COL15A1P39059 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
COL15A1P39059 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
COL15A1P39059 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC25.77■■□□□ 1.72
COL15A1P39059 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC25.77■■□□□ 1.72
COL15A1P39059 AL121829.2-201ENST00000620908 328 ntBASIC25.77■■□□□ 1.72
COL15A1P39059 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
COL15A1P39059 AC124283.5-201ENST00000624661 1809 ntBASIC25.76■■□□□ 1.71
COL15A1P39059 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
COL15A1P39059 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
COL15A1P39059 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
COL15A1P39059 SAPCD2P4-201ENST00000424595 1171 ntBASIC25.76■■□□□ 1.71
COL15A1P39059 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
COL15A1P39059 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC25.76■■□□□ 1.71
COL15A1P39059 AP003071.4-201ENST00000562276 1284 ntBASIC25.76■■□□□ 1.71
COL15A1P39059 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
COL15A1P39059 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC25.76■■□□□ 1.71
COL15A1P39059 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC25.75■■□□□ 1.71
COL15A1P39059 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
COL15A1P39059 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC25.75■■□□□ 1.71
COL15A1P39059 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
COL15A1P39059 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
COL15A1P39059 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC25.75■■□□□ 1.71
COL15A1P39059 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
COL15A1P39059 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC25.75■■□□□ 1.71
COL15A1P39059 TK2-213ENST00000563369 882 ntTSL 5 BASIC25.75■■□□□ 1.71
COL15A1P39059 AF186192.3-201ENST00000583427 947 ntBASIC25.75■■□□□ 1.71
COL15A1P39059 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
COL15A1P39059 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms