Protein–RNA interactions for Protein: P38956

SNF11, Transcription regulatory protein SNF11, yeastyeast

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SNF11P38956 SAG1YJR004C 1953 nt0.28□□□□□ -2.36
SNF11P38956 tF(GAA)BtF(GAA)B 73 nt0.28□□□□□ -2.36
SNF11P38956 tF(GAA)FtF(GAA)F 73 nt0.28□□□□□ -2.36
SNF11P38956 tF(GAA)GtF(GAA)G 73 nt0.28□□□□□ -2.36
SNF11P38956 tF(GAA)H1tF(GAA)H1 73 nt0.28□□□□□ -2.36
SNF11P38956 tF(GAA)H2tF(GAA)H2 73 nt0.28□□□□□ -2.36
SNF11P38956 tF(GAA)MtF(GAA)M 73 nt0.28□□□□□ -2.36
SNF11P38956 tF(GAA)P1tF(GAA)P1 73 nt0.28□□□□□ -2.36
SNF11P38956 tF(GAA)P2tF(GAA)P2 73 nt0.28□□□□□ -2.36
SNF11P38956 YHR063W-AYHR063W-A 336 nt0.28□□□□□ -2.36
SNF11P38956 YKL145W-AYKL145W-A 93 nt0.28□□□□□ -2.36
SNF11P38956 PAU18YLL064C 363 nt0.28□□□□□ -2.36
SNF11P38956 PAU6YNR076W 363 nt0.28□□□□□ -2.36
SNF11P38956 YOR199WYOR199W 330 nt0.28□□□□□ -2.36
SNF11P38956 IRC13YOR235W 315 nt0.28□□□□□ -2.36
SNF11P38956 SLM6YBR266C 453 nt0.28□□□□□ -2.36
SNF11P38956 KAR3YPR141C 2190 nt0.28□□□□□ -2.37
SNF11P38956 REF2YDR195W 1602 nt0.27□□□□□ -2.37
SNF11P38956 FMP27YLR454W 7887 nt0.27□□□□□ -2.37
SNF11P38956 NUT1YGL151W 3399 nt0.27□□□□□ -2.37
SNF11P38956 FIG4YNL325C 2640 nt0.27□□□□□ -2.37
SNF11P38956 RSM18YER050C 417 nt0.27□□□□□ -2.37
SNF11P38956 IES5YER092W 378 nt0.27□□□□□ -2.37
SNF11P38956 RPL29YFR032C-A 180 nt0.27□□□□□ -2.37
SNF11P38956 GSP1YLR293C 660 nt0.27□□□□□ -2.37
SNF11P38956 UFE1YOR075W 1041 nt0.27□□□□□ -2.37
SNF11P38956 STO1YMR125W 2586 nt0.27□□□□□ -2.37
SNF11P38956 YDR509WYDR509W 348 nt0.26□□□□□ -2.37
SNF11P38956 EDC1YGL222C 528 nt0.26□□□□□ -2.37
SNF11P38956 ABF2YMR072W 552 nt0.26□□□□□ -2.37
SNF11P38956 PAN2YGL094C 3348 nt0.25□□□□□ -2.37
SNF11P38956 NTF2YER009W 378 nt0.25□□□□□ -2.37
SNF11P38956 SRP14YDL092W 441 nt0.24□□□□□ -2.37
SNF11P38956 UBX4YMR067C 1251 nt0.24□□□□□ -2.37
SNF11P38956 YOR020W-AYOR020W-A 273 nt0.24□□□□□ -2.37
SNF11P38956 ZIP1YDR285W 2628 nt0.24□□□□□ -2.37
SNF11P38956 DBP6YNR038W 1890 nt0.24□□□□□ -2.37
SNF11P38956 AI1Q0050 2505 nt0.24□□□□□ -2.37
SNF11P38956 YPR172WYPR172W 603 nt0.23□□□□□ -2.37
SNF11P38956 NUP82YJL061W 2142 nt0.23□□□□□ -2.37
SNF11P38956 HDA3YPR179C 1968 nt0.23□□□□□ -2.37
SNF11P38956 YEL018C-AYEL018C-A 534 nt0.22□□□□□ -2.37
SNF11P38956 YGL042CYGL042C 306 nt0.22□□□□□ -2.37
SNF11P38956 YGL204CYGL204C 306 nt0.22□□□□□ -2.37
SNF11P38956 GMC2YLR445W 567 nt0.22□□□□□ -2.37
SNF11P38956 VPS52YDR484W 1926 nt0.22□□□□□ -2.37
SNF11P38956 PDE2YOR360C 1581 nt0.22□□□□□ -2.37
SNF11P38956 YDL068WYDL068W 330 nt0.21□□□□□ -2.38
SNF11P38956 OCA6YDR067C 675 nt0.21□□□□□ -2.38
SNF11P38956 VPS74YDR372C 1038 nt0.21□□□□□ -2.38
SNF11P38956 WIP1YDR374W-A 270 nt0.21□□□□□ -2.38
SNF11P38956 YJL086CYJL086C 369 nt0.21□□□□□ -2.38
SNF11P38956 YLR163W-AYLR163W-A 114 nt0.21□□□□□ -2.38
SNF11P38956 SPC2YML055W 537 nt0.21□□□□□ -2.38
SNF11P38956 RPS7BYNL096C 573 nt0.21□□□□□ -2.38
SNF11P38956 YCK3YER123W 1575 nt0.2□□□□□ -2.38
SNF11P38956 MKT1YNL085W 2493 nt0.2□□□□□ -2.38
SNF11P38956 PSF2YJL072C 642 nt0.2□□□□□ -2.38
SNF11P38956 RUF22RUF22 515 nt0.2□□□□□ -2.38
SNF11P38956 SPR2YOR214C 711 nt0.2□□□□□ -2.38
SNF11P38956 SCW11YGL028C 1629 nt0.2□□□□□ -2.38
SNF11P38956 TRS65YGR166W 1683 nt0.19□□□□□ -2.38
SNF11P38956 YOP1YPR028W 543 nt0.19□□□□□ -2.38
SNF11P38956 YPR170CYPR170C 336 nt0.19□□□□□ -2.38
SNF11P38956 AI5_ALPHAQ0070 1893 nt0.18□□□□□ -2.38
SNF11P38956 GEA2YEL022W 4380 nt0.18□□□□□ -2.38
SNF11P38956 YDR003W-AYDR003W-A 123 nt0.18□□□□□ -2.38
SNF11P38956 SPO13YHR014W 876 nt0.18□□□□□ -2.38
SNF11P38956 TIM8YJR135W-A 264 nt0.18□□□□□ -2.38
SNF11P38956 VPS63YLR261C 327 nt0.18□□□□□ -2.38
SNF11P38956 YBL068W-AYBL068W-A 237 nt0.18□□□□□ -2.38
SNF11P38956 YOR366WYOR366W 354 nt0.18□□□□□ -2.38
SNF11P38956 SWI5YDR146C 2130 nt0.17□□□□□ -2.38
SNF11P38956 ATC1YDR184C 885 nt0.17□□□□□ -2.38
SNF11P38956 SLD3YGL113W 2007 nt0.16□□□□□ -2.38
SNF11P38956 PAU12YGR294W 363 nt0.16□□□□□ -2.38
SNF11P38956 YOL014WYOL014W 375 nt0.16□□□□□ -2.38
SNF11P38956 snR44snR44 211 nt0.16□□□□□ -2.38
SNF11P38956 WAR1YML076C 2835 nt0.16□□□□□ -2.38
SNF11P38956 PPN1YDR452W 2025 nt0.14□□□□□ -2.39
SNF11P38956 BEM3YPL115C 3387 nt0.14□□□□□ -2.39
SNF11P38956 IQG1YPL242C 4488 nt0.14□□□□□ -2.39
SNF11P38956 MMS4YBR098W 2076 nt0.14□□□□□ -2.39
SNF11P38956 SDH2YLL041C 801 nt0.14□□□□□ -2.39
SNF11P38956 NUP120YKL057C 3114 nt0.14□□□□□ -2.39
SNF11P38956 ISD11YER048W-A 285 nt0.13□□□□□ -2.39
SNF11P38956 PHS1YJL097W 654 nt0.13□□□□□ -2.39
SNF11P38956 ARV1YLR242C 966 nt0.13□□□□□ -2.39
SNF11P38956 GIM5YML094W 492 nt0.13□□□□□ -2.39
SNF11P38956 ATG16YMR159C 453 nt0.13□□□□□ -2.39
SNF11P38956 BIR1YJR089W 2865 nt0.13□□□□□ -2.39
SNF11P38956 KAR1YNL188W 1302 nt0.13□□□□□ -2.39
SNF11P38956 HNT1YDL125C 477 nt0.12□□□□□ -2.39
SNF11P38956 RMD6YEL072W 696 nt0.12□□□□□ -2.39
SNF11P38956 YHR028W-AYHR028W-A 321 nt0.12□□□□□ -2.39
SNF11P38956 RPS24BYIL069C 408 nt0.12□□□□□ -2.39
SNF11P38956 YIL134C-AYIL134C-A 204 nt0.12□□□□□ -2.39
SNF11P38956 SUS1YBR111W-A 291 nt0.12□□□□□ -2.39
SNF11P38956 15S_rRNA15S_rRNA 1649 nt0.12□□□□□ -2.39
SNF11P38956 BFR2YDR299W 1605 nt0.12□□□□□ -2.39
Retrieved 100 of 7,029 protein–RNA pairs in 48 ms