Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 YBR184WYBR184W 1572 nt2.99□□□□□ -1.93
MSH3P25336 DUG2YBR281C 2637 nt2.99□□□□□ -1.93
MSH3P25336 VPS34YLR240W 2628 nt2.98□□□□□ -1.93
MSH3P25336 PLC1YPL268W 2610 nt2.98□□□□□ -1.93
MSH3P25336 SNF5YBR289W 2718 nt2.98□□□□□ -1.93
MSH3P25336 INA22YIR024C 651 nt2.98□□□□□ -1.93
MSH3P25336 COA4YLR218C 453 nt2.98□□□□□ -1.93
MSH3P25336 CAF120YNL278W 3183 nt2.98□□□□□ -1.93
MSH3P25336 YDR239CYDR239C 2364 nt2.98□□□□□ -1.93
MSH3P25336 YLR149CYLR149C 2193 nt2.98□□□□□ -1.93
MSH3P25336 MET6YER091C 2304 nt2.98□□□□□ -1.93
MSH3P25336 TCB2YNL087W 3537 nt2.97□□□□□ -1.93
MSH3P25336 YPL216WYPL216W 3309 nt2.97□□□□□ -1.93
MSH3P25336 SPT21YMR179W 2277 nt2.97□□□□□ -1.93
MSH3P25336 GCV2YMR189W 3105 nt2.97□□□□□ -1.93
MSH3P25336 YLR146W-AYLR146W-A 189 nt2.97□□□□□ -1.93
MSH3P25336 RPS12YOR369C 432 nt2.97□□□□□ -1.93
MSH3P25336 YKU70YMR284W 1809 nt2.97□□□□□ -1.93
MSH3P25336 RIC1YLR039C 3171 nt2.97□□□□□ -1.93
MSH3P25336 RGA2YDR379W 3030 nt2.97□□□□□ -1.93
MSH3P25336 GRR1YJR090C 3456 nt2.96□□□□□ -1.94
MSH3P25336 SUL1YBR294W 2580 nt2.96□□□□□ -1.94
MSH3P25336 PEP3YLR148W 2757 nt2.95□□□□□ -1.94
MSH3P25336 SDC25YLL016W 3147 nt2.95□□□□□ -1.94
MSH3P25336 UTP14YML093W 2700 nt2.95□□□□□ -1.94
MSH3P25336 INP2YMR163C 2118 nt2.95□□□□□ -1.94
MSH3P25336 SSQ1YLR369W 1974 nt2.95□□□□□ -1.94
MSH3P25336 COX14YML129C 213 nt2.95□□□□□ -1.94
MSH3P25336 CRS5YOR031W 210 nt2.95□□□□□ -1.94
MSH3P25336 YPR092WYPR092W 306 nt2.95□□□□□ -1.94
MSH3P25336 YBR182C-AYBR182C-A 195 nt2.95□□□□□ -1.94
MSH3P25336 TAE2YPL009C 3117 nt2.95□□□□□ -1.94
MSH3P25336 FIR1YER032W 2631 nt2.95□□□□□ -1.94
MSH3P25336 RTT10YPL183C 3042 nt2.95□□□□□ -1.94
MSH3P25336 PHO2YDL106C 1680 nt2.95□□□□□ -1.94
MSH3P25336 PRP8YHR165C 7242 nt2.94□□□□□ -1.94
MSH3P25336 YDR186CYDR186C 2634 nt2.94□□□□□ -1.94
MSH3P25336 VPS16YPL045W 2397 nt2.94□□□□□ -1.94
MSH3P25336 MUK1YPL070W 1839 nt2.94□□□□□ -1.94
MSH3P25336 VPS54YDR027C 2670 nt2.94□□□□□ -1.94
MSH3P25336 MMS22YLR320W 4365 nt2.94□□□□□ -1.94
MSH3P25336 YOR376WYOR376W 369 nt2.94□□□□□ -1.94
MSH3P25336 SEC5YDR166C 2916 nt2.94□□□□□ -1.94
MSH3P25336 PXA2YKL188C 2562 nt2.93□□□□□ -1.94
MSH3P25336 KTI11YBL071W-A 249 nt2.93□□□□□ -1.94
MSH3P25336 snR43snR43 209 nt2.93□□□□□ -1.94
MSH3P25336 SLH1YGR271W 5904 nt2.93□□□□□ -1.94
MSH3P25336 MRP10YDL045W-A 288 nt2.92□□□□□ -1.94
MSH3P25336 SWI6YLR182W 2412 nt2.92□□□□□ -1.94
MSH3P25336 AFI1YOR129C 2682 nt2.92□□□□□ -1.94
MSH3P25336 YNL205CYNL205C 423 nt2.91□□□□□ -1.94
MSH3P25336 CRM1YGR218W 3255 nt2.91□□□□□ -1.94
MSH3P25336 SCH9YHR205W 2475 nt2.91□□□□□ -1.94
MSH3P25336 GEA1YJR031C 4227 nt2.9□□□□□ -1.95
MSH3P25336 ACB1YGR037C 264 nt2.9□□□□□ -1.95
MSH3P25336 YNL097C-BYNL097C-B 123 nt2.9□□□□□ -1.95
MSH3P25336 YPL150WYPL150W 2706 nt2.9□□□□□ -1.95
MSH3P25336 SRO77YBL106C 3033 nt2.9□□□□□ -1.95
MSH3P25336 CYR1YJL005W 6081 nt2.89□□□□□ -1.95
MSH3P25336 YNL114CYNL114C 372 nt2.89□□□□□ -1.95
MSH3P25336 YBR277CYBR277C 402 nt2.89□□□□□ -1.95
MSH3P25336 YIR030W-AYIR030W-A 384 nt2.88□□□□□ -1.95
MSH3P25336 ACM1YPL267W 630 nt2.88□□□□□ -1.95
MSH3P25336 RSE1YML049C 4086 nt2.88□□□□□ -1.95
MSH3P25336 SSN2YDR443C 4263 nt2.88□□□□□ -1.95
MSH3P25336 RPH1YER169W 2391 nt2.88□□□□□ -1.95
MSH3P25336 MNL2YLR057W 2550 nt2.88□□□□□ -1.95
MSH3P25336 YEF3YLR249W 3135 nt2.88□□□□□ -1.95
MSH3P25336 INP53YOR109W 3324 nt2.87□□□□□ -1.95
MSH3P25336 YGL217CYGL217C 342 nt2.87□□□□□ -1.95
MSH3P25336 YGR164WYGR164W 336 nt2.87□□□□□ -1.95
MSH3P25336 YAL042C-AYAL042C-A 378 nt2.87□□□□□ -1.95
MSH3P25336 snR46snR46 197 nt2.87□□□□□ -1.95
MSH3P25336 UBP15YMR304W 3693 nt2.87□□□□□ -1.95
MSH3P25336 MLH1YMR167W 2310 nt2.86□□□□□ -1.95
MSH3P25336 SGM1YJR134C 2124 nt2.86□□□□□ -1.95
MSH3P25336 snR74snR74 88 nt2.86□□□□□ -1.95
MSH3P25336 SPO22YIL073C 2928 nt2.86□□□□□ -1.95
MSH3P25336 RRP6YOR001W 2202 nt2.86□□□□□ -1.95
MSH3P25336 IRR1YIL026C 3453 nt2.85□□□□□ -1.95
MSH3P25336 RPL42BYHR141C 321 nt2.85□□□□□ -1.95
MSH3P25336 EMC6YLL014W 327 nt2.85□□□□□ -1.95
MSH3P25336 RPL42AYNL162W 321 nt2.85□□□□□ -1.95
MSH3P25336 RPB10YOR210W 213 nt2.85□□□□□ -1.95
MSH3P25336 BCK1YJL095W 4437 nt2.85□□□□□ -1.95
MSH3P25336 STB4YMR019W 2850 nt2.85□□□□□ -1.95
MSH3P25336 SLY1YDR189W 2001 nt2.85□□□□□ -1.95
MSH3P25336 YEL043WYEL043W 2871 nt2.84□□□□□ -1.95
MSH3P25336 snR85snR85 171 nt2.84□□□□□ -1.95
MSH3P25336 SNC1YAL030W 354 nt2.84□□□□□ -1.95
MSH3P25336 YBL083CYBL083C 426 nt2.84□□□□□ -1.95
MSH3P25336 SGF11YPL047W 300 nt2.84□□□□□ -1.95
MSH3P25336 RFX1YLR176C 2436 nt2.83□□□□□ -1.96
MSH3P25336 DNA2YHR164C 4569 nt2.83□□□□□ -1.96
MSH3P25336 LRE1YCL051W 1752 nt2.83□□□□□ -1.96
MSH3P25336 YIL020C-AYIL020C-A 339 nt2.83□□□□□ -1.96
MSH3P25336 MPT5YGL178W 2580 nt2.83□□□□□ -1.96
MSH3P25336 YOR218CYOR218C 420 nt2.82□□□□□ -1.96
MSH3P25336 PTP3YER075C 2787 nt2.82□□□□□ -1.96
MSH3P25336 YIL080WYIL080W 4722 nt2.81□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 66.5 ms