Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CCL1P22362 AC007952.6-201ENST00000573168 2673 ntBASIC17.42■□□□□ 0.38
CCL1P22362 AC003957.1-201ENST00000625108 2673 ntBASIC17.42■□□□□ 0.38
CCL1P22362 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL1P22362 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL1P22362 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL1P22362 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CCL1P22362 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.42■□□□□ 0.38
CCL1P22362 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.42■□□□□ 0.38
CCL1P22362 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.42■□□□□ 0.38
CCL1P22362 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL1P22362 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL1P22362 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL1P22362 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL1P22362 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCL1P22362 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL1P22362 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL1P22362 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCL1P22362 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCL1P22362 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.41■□□□□ 0.38
CCL1P22362 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCL1P22362 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL1P22362 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CCL1P22362 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL1P22362 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL1P22362 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.41■□□□□ 0.38
CCL1P22362 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL1P22362 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL1P22362 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL1P22362 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCL1P22362 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.41■□□□□ 0.38
CCL1P22362 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCL1P22362 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCL1P22362 AC016405.3-201ENST00000607710 860 ntBASIC17.41■□□□□ 0.38
CCL1P22362 AC100791.3-201ENST00000617619 330 ntBASIC17.41■□□□□ 0.38
CCL1P22362 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.41■□□□□ 0.38
CCL1P22362 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL1P22362 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCL1P22362 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.41■□□□□ 0.38
CCL1P22362 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCL1P22362 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.41■□□□□ 0.38
CCL1P22362 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCL1P22362 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CCL1P22362 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL1P22362 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL1P22362 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.41■□□□□ 0.38
CCL1P22362 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL1P22362 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL1P22362 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CCL1P22362 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCL1P22362 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.4■□□□□ 0.38
CCL1P22362 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCL1P22362 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL1P22362 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCL1P22362 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.4■□□□□ 0.38
CCL1P22362 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCL1P22362 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.4■□□□□ 0.38
CCL1P22362 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL1P22362 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.4■□□□□ 0.38
CCL1P22362 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.4■□□□□ 0.38
CCL1P22362 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.4■□□□□ 0.38
CCL1P22362 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCL1P22362 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
CCL1P22362 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
CCL1P22362 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCL1P22362 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
CCL1P22362 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL1P22362 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.4■□□□□ 0.38
CCL1P22362 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL1P22362 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL1P22362 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CCL1P22362 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CCL1P22362 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.4■□□□□ 0.38
CCL1P22362 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCL1P22362 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCL1P22362 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CCL1P22362 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL1P22362 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL1P22362 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCL1P22362 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL1P22362 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL1P22362 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
CCL1P22362 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.39■□□□□ 0.37
CCL1P22362 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.39■□□□□ 0.37
CCL1P22362 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL1P22362 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCL1P22362 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.39■□□□□ 0.37
CCL1P22362 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL1P22362 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL1P22362 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCL1P22362 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.39■□□□□ 0.37
CCL1P22362 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.39■□□□□ 0.37
CCL1P22362 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.39■□□□□ 0.37
CCL1P22362 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.39■□□□□ 0.37
CCL1P22362 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.39■□□□□ 0.37
CCL1P22362 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CCL1P22362 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CCL1P22362 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL1P22362 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL1P22362 PTBP1P-201ENST00000554374 1601 ntBASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms