Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.76■□□□□ 0.59
TNFRSF1BP20333 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.76■□□□□ 0.59
TNFRSF1BP20333 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
TNFRSF1BP20333 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TNFRSF1BP20333 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TNFRSF1BP20333 AL691432.2-201ENST00000607222 2038 ntBASIC18.76■□□□□ 0.59
TNFRSF1BP20333 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFRSF1BP20333 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFRSF1BP20333 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNFRSF1BP20333 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TNFRSF1BP20333 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNFRSF1BP20333 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNFRSF1BP20333 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.75■□□□□ 0.59
TNFRSF1BP20333 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TNFRSF1BP20333 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNFRSF1BP20333 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TNFRSF1BP20333 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TNFRSF1BP20333 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNFRSF1BP20333 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNFRSF1BP20333 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNFRSF1BP20333 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
TNFRSF1BP20333 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.75■□□□□ 0.59
TNFRSF1BP20333 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TNFRSF1BP20333 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.75■□□□□ 0.59
TNFRSF1BP20333 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.75■□□□□ 0.59
TNFRSF1BP20333 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.75■□□□□ 0.59
TNFRSF1BP20333 TERF1P2-201ENST00000583350 1212 ntBASIC18.75■□□□□ 0.59
TNFRSF1BP20333 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
TNFRSF1BP20333 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.75■□□□□ 0.59
TNFRSF1BP20333 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNFRSF1BP20333 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNFRSF1BP20333 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TNFRSF1BP20333 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNFRSF1BP20333 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNFRSF1BP20333 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNFRSF1BP20333 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNFRSF1BP20333 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNFRSF1BP20333 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNFRSF1BP20333 KRT8P36-201ENST00000489121 1440 ntBASIC18.74■□□□□ 0.59
TNFRSF1BP20333 RBM17P2-201ENST00000616397 1405 ntBASIC18.74■□□□□ 0.59
TNFRSF1BP20333 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.74■□□□□ 0.59
TNFRSF1BP20333 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNFRSF1BP20333 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.74■□□□□ 0.59
TNFRSF1BP20333 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.74■□□□□ 0.59
TNFRSF1BP20333 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNFRSF1BP20333 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNFRSF1BP20333 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNFRSF1BP20333 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNFRSF1BP20333 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
TNFRSF1BP20333 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TNFRSF1BP20333 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TNFRSF1BP20333 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TNFRSF1BP20333 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.74■□□□□ 0.59
TNFRSF1BP20333 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.74■□□□□ 0.59
TNFRSF1BP20333 CCDC92B-201ENST00000575506 885 ntBASIC18.74■□□□□ 0.59
TNFRSF1BP20333 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.74■□□□□ 0.59
TNFRSF1BP20333 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.74■□□□□ 0.59
TNFRSF1BP20333 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNFRSF1BP20333 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.74■□□□□ 0.59
TNFRSF1BP20333 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TNFRSF1BP20333 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNFRSF1BP20333 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.74■□□□□ 0.59
TNFRSF1BP20333 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TNFRSF1BP20333 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.74■□□□□ 0.59
TNFRSF1BP20333 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNFRSF1BP20333 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TNFRSF1BP20333 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TNFRSF1BP20333 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.73■□□□□ 0.59
TNFRSF1BP20333 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TNFRSF1BP20333 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TNFRSF1BP20333 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TNFRSF1BP20333 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TNFRSF1BP20333 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.73■□□□□ 0.59
TNFRSF1BP20333 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.73■□□□□ 0.59
TNFRSF1BP20333 AC007322.3-201ENST00000426526 701 ntBASIC18.73■□□□□ 0.59
TNFRSF1BP20333 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.73■□□□□ 0.59
TNFRSF1BP20333 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.73■□□□□ 0.59
TNFRSF1BP20333 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.73■□□□□ 0.59
TNFRSF1BP20333 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TNFRSF1BP20333 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TNFRSF1BP20333 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TNFRSF1BP20333 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TNFRSF1BP20333 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TNFRSF1BP20333 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.73■□□□□ 0.59
TNFRSF1BP20333 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TNFRSF1BP20333 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TNFRSF1BP20333 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.73■□□□□ 0.59
TNFRSF1BP20333 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TNFRSF1BP20333 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TNFRSF1BP20333 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TNFRSF1BP20333 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFRSF1BP20333 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.72■□□□□ 0.59
TNFRSF1BP20333 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFRSF1BP20333 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TNFRSF1BP20333 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFRSF1BP20333 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFRSF1BP20333 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFRSF1BP20333 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFRSF1BP20333 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.72■□□□□ 0.59
TNFRSF1BP20333 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms