Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NFKB1P19838 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NFKB1P19838 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
NFKB1P19838 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.59■□□□□ 0.89
NFKB1P19838 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
NFKB1P19838 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.59■□□□□ 0.89
NFKB1P19838 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.59■□□□□ 0.89
NFKB1P19838 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NFKB1P19838 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NFKB1P19838 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NFKB1P19838 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NFKB1P19838 RAP2CP1-201ENST00000605103 478 ntBASIC20.59■□□□□ 0.89
NFKB1P19838 AL050303.2-201ENST00000619798 666 ntBASIC20.59■□□□□ 0.89
NFKB1P19838 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NFKB1P19838 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NFKB1P19838 SLC25A24-204ENST00000569674 2357 ntBASIC20.59■□□□□ 0.89
NFKB1P19838 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NFKB1P19838 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
NFKB1P19838 PCDHAC2-203ENST00000615316 3011 ntBASIC20.59■□□□□ 0.89
NFKB1P19838 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
NFKB1P19838 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.58■□□□□ 0.89
NFKB1P19838 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.58■□□□□ 0.89
NFKB1P19838 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NFKB1P19838 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
NFKB1P19838 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.58■□□□□ 0.89
NFKB1P19838 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
NFKB1P19838 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NFKB1P19838 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NFKB1P19838 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.58■□□□□ 0.89
NFKB1P19838 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NFKB1P19838 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NFKB1P19838 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NFKB1P19838 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.58■□□□□ 0.89
NFKB1P19838 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.58■□□□□ 0.89
NFKB1P19838 CYP2T3P-201ENST00000601990 817 ntBASIC20.58■□□□□ 0.89
NFKB1P19838 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NFKB1P19838 AC010980.2-201ENST00000587099 1412 ntBASIC20.58■□□□□ 0.88
NFKB1P19838 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NFKB1P19838 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NFKB1P19838 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.58■□□□□ 0.88
NFKB1P19838 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NFKB1P19838 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.58■□□□□ 0.88
NFKB1P19838 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
NFKB1P19838 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NFKB1P19838 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NFKB1P19838 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NFKB1P19838 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NFKB1P19838 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.57■□□□□ 0.88
NFKB1P19838 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
NFKB1P19838 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NFKB1P19838 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
NFKB1P19838 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.57■□□□□ 0.88
NFKB1P19838 MIR663A-201ENST00000385250 93 ntBASIC20.57■□□□□ 0.88
NFKB1P19838 KRT18P68-201ENST00000392293 1000 ntBASIC20.57■□□□□ 0.88
NFKB1P19838 AC026185.1-201ENST00000445748 174 ntBASIC20.57■□□□□ 0.88
NFKB1P19838 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NFKB1P19838 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
NFKB1P19838 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.57■□□□□ 0.88
NFKB1P19838 AC105020.6-201ENST00000621523 1217 ntBASIC20.57■□□□□ 0.88
NFKB1P19838 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NFKB1P19838 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NFKB1P19838 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NFKB1P19838 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.57■□□□□ 0.88
NFKB1P19838 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NFKB1P19838 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NFKB1P19838 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
NFKB1P19838 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NFKB1P19838 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.56■□□□□ 0.88
NFKB1P19838 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NFKB1P19838 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
NFKB1P19838 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NFKB1P19838 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NFKB1P19838 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NFKB1P19838 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.56■□□□□ 0.88
NFKB1P19838 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.56■□□□□ 0.88
NFKB1P19838 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
NFKB1P19838 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NFKB1P19838 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NFKB1P19838 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NFKB1P19838 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.56■□□□□ 0.88
NFKB1P19838 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NFKB1P19838 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NFKB1P19838 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NFKB1P19838 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.56■□□□□ 0.88
NFKB1P19838 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NFKB1P19838 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NFKB1P19838 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NFKB1P19838 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.55■□□□□ 0.88
NFKB1P19838 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.55■□□□□ 0.88
NFKB1P19838 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.55■□□□□ 0.88
NFKB1P19838 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NFKB1P19838 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
NFKB1P19838 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NFKB1P19838 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NFKB1P19838 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.55■□□□□ 0.88
NFKB1P19838 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.55■□□□□ 0.88
NFKB1P19838 CROCCP5-201ENST00000436658 830 ntBASIC20.55■□□□□ 0.88
NFKB1P19838 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NFKB1P19838 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.55■□□□□ 0.88
NFKB1P19838 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms