Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.66■□□□□ 0.58
PRKCAP17252 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRKCAP17252 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.65■□□□□ 0.58
PRKCAP17252 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PRKCAP17252 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PRKCAP17252 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.65■□□□□ 0.58
PRKCAP17252 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRKCAP17252 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRKCAP17252 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRKCAP17252 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRKCAP17252 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRKCAP17252 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRKCAP17252 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRKCAP17252 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRKCAP17252 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.65■□□□□ 0.58
PRKCAP17252 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.65■□□□□ 0.58
PRKCAP17252 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRKCAP17252 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.65■□□□□ 0.58
PRKCAP17252 RAP2CP1-201ENST00000605103 478 ntBASIC18.65■□□□□ 0.58
PRKCAP17252 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRKCAP17252 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRKCAP17252 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.65■□□□□ 0.58
PRKCAP17252 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRKCAP17252 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PRKCAP17252 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRKCAP17252 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRKCAP17252 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PRKCAP17252 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRKCAP17252 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRKCAP17252 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.65■□□□□ 0.58
PRKCAP17252 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRKCAP17252 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
PRKCAP17252 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.58
PRKCAP17252 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.64■□□□□ 0.58
PRKCAP17252 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PRKCAP17252 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.64■□□□□ 0.58
PRKCAP17252 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
PRKCAP17252 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRKCAP17252 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRKCAP17252 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRKCAP17252 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.64■□□□□ 0.57
PRKCAP17252 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRKCAP17252 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRKCAP17252 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.64■□□□□ 0.57
PRKCAP17252 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRKCAP17252 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRKCAP17252 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
PRKCAP17252 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.64■□□□□ 0.57
PRKCAP17252 CYP2T1P-201ENST00000432607 1285 ntBASIC18.64■□□□□ 0.57
PRKCAP17252 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PRKCAP17252 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.64■□□□□ 0.57
PRKCAP17252 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.64■□□□□ 0.57
PRKCAP17252 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
PRKCAP17252 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRKCAP17252 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRKCAP17252 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRKCAP17252 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.64■□□□□ 0.57
PRKCAP17252 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.64■□□□□ 0.57
PRKCAP17252 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PRKCAP17252 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRKCAP17252 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.63■□□□□ 0.57
PRKCAP17252 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.63■□□□□ 0.57
PRKCAP17252 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRKCAP17252 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRKCAP17252 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PRKCAP17252 AC027702.1-201ENST00000563810 1770 ntBASIC18.63■□□□□ 0.57
PRKCAP17252 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.63■□□□□ 0.57
PRKCAP17252 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRKCAP17252 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRKCAP17252 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRKCAP17252 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PRKCAP17252 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.63■□□□□ 0.57
PRKCAP17252 AC026185.1-201ENST00000445748 174 ntBASIC18.63■□□□□ 0.57
PRKCAP17252 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.63■□□□□ 0.57
PRKCAP17252 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PRKCAP17252 AC005181.1-201ENST00000604782 1256 ntBASIC18.63■□□□□ 0.57
PRKCAP17252 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.63■□□□□ 0.57
PRKCAP17252 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PRKCAP17252 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PRKCAP17252 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PRKCAP17252 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRKCAP17252 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.63■□□□□ 0.57
PRKCAP17252 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PRKCAP17252 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRKCAP17252 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRKCAP17252 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.63■□□□□ 0.57
PRKCAP17252 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PRKCAP17252 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PRKCAP17252 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRKCAP17252 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PRKCAP17252 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRKCAP17252 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PRKCAP17252 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRKCAP17252 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.62■□□□□ 0.57
PRKCAP17252 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PRKCAP17252 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRKCAP17252 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.62■□□□□ 0.57
PRKCAP17252 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.62■□□□□ 0.57
PRKCAP17252 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.62■□□□□ 0.57
PRKCAP17252 RARRES2P4-201ENST00000514074 484 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms