Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RARAP10276 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.22■□□□□ 0.99
RARAP10276 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.22■□□□□ 0.99
RARAP10276 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.22■□□□□ 0.99
RARAP10276 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.22■□□□□ 0.99
RARAP10276 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RARAP10276 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.22■□□□□ 0.99
RARAP10276 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RARAP10276 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.22■□□□□ 0.99
RARAP10276 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RARAP10276 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RARAP10276 MIR935-201ENST00000401179 91 ntBASIC21.21■□□□□ 0.99
RARAP10276 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.21■□□□□ 0.99
RARAP10276 AL162412.1-201ENST00000567129 965 ntBASIC21.21■□□□□ 0.99
RARAP10276 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.21■□□□□ 0.99
RARAP10276 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.21■□□□□ 0.99
RARAP10276 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.21■□□□□ 0.99
RARAP10276 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RARAP10276 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RARAP10276 KRT8P36-201ENST00000489121 1440 ntBASIC21.21■□□□□ 0.99
RARAP10276 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RARAP10276 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RARAP10276 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.2■□□□□ 0.98
RARAP10276 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RARAP10276 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RARAP10276 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.2■□□□□ 0.98
RARAP10276 BID-214ENST00000617586 542 ntTSL 5 BASIC21.2■□□□□ 0.98
RARAP10276 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RARAP10276 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RARAP10276 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.2■□□□□ 0.98
RARAP10276 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RARAP10276 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
RARAP10276 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RARAP10276 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RARAP10276 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RARAP10276 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RARAP10276 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.19■□□□□ 0.98
RARAP10276 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RARAP10276 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RARAP10276 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RARAP10276 SMG8-203ENST00000578922 2178 ntBASIC21.19■□□□□ 0.98
RARAP10276 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.19■□□□□ 0.98
RARAP10276 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RARAP10276 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RARAP10276 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RARAP10276 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.19■□□□□ 0.98
RARAP10276 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.19■□□□□ 0.98
RARAP10276 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RARAP10276 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.19■□□□□ 0.98
RARAP10276 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RARAP10276 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.19■□□□□ 0.98
RARAP10276 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.19■□□□□ 0.98
RARAP10276 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.19■□□□□ 0.98
RARAP10276 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RARAP10276 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RARAP10276 AC068338.2-201ENST00000563278 1430 ntBASIC21.19■□□□□ 0.98
RARAP10276 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RARAP10276 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.18■□□□□ 0.98
RARAP10276 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RARAP10276 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
RARAP10276 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RARAP10276 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RARAP10276 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RARAP10276 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RARAP10276 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RARAP10276 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.18■□□□□ 0.98
RARAP10276 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RARAP10276 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.18■□□□□ 0.98
RARAP10276 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RARAP10276 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
RARAP10276 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RARAP10276 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RARAP10276 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.18■□□□□ 0.98
RARAP10276 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.18■□□□□ 0.98
RARAP10276 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.18■□□□□ 0.98
RARAP10276 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RARAP10276 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RARAP10276 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RARAP10276 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RARAP10276 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
RARAP10276 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
RARAP10276 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RARAP10276 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RARAP10276 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RARAP10276 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RARAP10276 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RARAP10276 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RARAP10276 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.17■□□□□ 0.98
RARAP10276 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RARAP10276 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RARAP10276 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RARAP10276 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RARAP10276 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.17■□□□□ 0.98
RARAP10276 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.17■□□□□ 0.98
RARAP10276 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RARAP10276 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.17■□□□□ 0.98
RARAP10276 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.17■□□□□ 0.98
RARAP10276 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RARAP10276 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RARAP10276 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms