Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 YAP3YHL009C 993 nt0.55□□□□□ -2.32
RPL40BP0CH09 VPS63YLR261C 327 nt0.55□□□□□ -2.32
RPL40BP0CH09 RUB1YDR139C 234 nt0.54□□□□□ -2.32
RPL40BP0CH09 RMD6YEL072W 696 nt0.54□□□□□ -2.32
RPL40BP0CH09 CRG1YHR209W 876 nt0.54□□□□□ -2.32
RPL40BP0CH09 YJL086CYJL086C 369 nt0.54□□□□□ -2.32
RPL40BP0CH09 HYM1YKL189W 1200 nt0.54□□□□□ -2.32
RPL40BP0CH09 GIM5YML094W 492 nt0.54□□□□□ -2.32
RPL40BP0CH09 YMR031W-AYMR031W-A 327 nt0.54□□□□□ -2.32
RPL40BP0CH09 YMR158C-AYMR158C-A 138 nt0.54□□□□□ -2.32
RPL40BP0CH09 BRX1YOL077C 876 nt0.54□□□□□ -2.32
RPL40BP0CH09 UFE1YOR075W 1041 nt0.54□□□□□ -2.32
RPL40BP0CH09 YPR159C-AYPR159C-A 102 nt0.54□□□□□ -2.32
RPL40BP0CH09 STB6YKL072W 2301 nt0.54□□□□□ -2.32
RPL40BP0CH09 AIM9YER080W 1884 nt0.54□□□□□ -2.32
RPL40BP0CH09 GDS1YOR355W 1569 nt0.53□□□□□ -2.32
RPL40BP0CH09 SPT21YMR179W 2277 nt0.53□□□□□ -2.32
RPL40BP0CH09 VPS74YDR372C 1038 nt0.53□□□□□ -2.32
RPL40BP0CH09 RTR1YER139C 681 nt0.53□□□□□ -2.32
RPL40BP0CH09 YGR265WYGR265W 411 nt0.53□□□□□ -2.32
RPL40BP0CH09 SLS1YLR139C 1932 nt0.52□□□□□ -2.33
RPL40BP0CH09 LSO2YGR169C-A 279 nt0.52□□□□□ -2.33
RPL40BP0CH09 RCN1YKL159C 636 nt0.52□□□□□ -2.33
RPL40BP0CH09 SEC22YLR268W 645 nt0.52□□□□□ -2.33
RPL40BP0CH09 DDR48YMR173W 1293 nt0.52□□□□□ -2.33
RPL40BP0CH09 YBR184WYBR184W 1572 nt0.52□□□□□ -2.33
RPL40BP0CH09 YLL007CYLL007C 1998 nt0.52□□□□□ -2.33
RPL40BP0CH09 CHZ1YER030W 462 nt0.51□□□□□ -2.33
RPL40BP0CH09 VMA7YGR020C 357 nt0.51□□□□□ -2.33
RPL40BP0CH09 DPB11YJL090C 2295 nt0.51□□□□□ -2.33
RPL40BP0CH09 SUS1YBR111W-A 291 nt0.51□□□□□ -2.33
RPL40BP0CH09 HAL9YOL089C 3093 nt0.51□□□□□ -2.33
RPL40BP0CH09 YDR034C-CYDR034C-C 1317 nt0.5□□□□□ -2.33
RPL40BP0CH09 YFL002W-BYFL002W-B 1317 nt0.5□□□□□ -2.33
RPL40BP0CH09 YGR161W-AYGR161W-A 1317 nt0.5□□□□□ -2.33
RPL40BP0CH09 YLR410W-AYLR410W-A 1317 nt0.5□□□□□ -2.33
RPL40BP0CH09 YBL100W-AYBL100W-A 1317 nt0.5□□□□□ -2.33
RPL40BP0CH09 YOR192C-AYOR192C-A 1317 nt0.5□□□□□ -2.33
RPL40BP0CH09 YCL020WYCL020W 1317 nt0.5□□□□□ -2.33
RPL40BP0CH09 YGL042CYGL042C 306 nt0.5□□□□□ -2.33
RPL40BP0CH09 RPL42BYHR141C 321 nt0.5□□□□□ -2.33
RPL40BP0CH09 YMR324CYMR324C 243 nt0.5□□□□□ -2.33
RPL40BP0CH09 RPL42AYNL162W 321 nt0.5□□□□□ -2.33
RPL40BP0CH09 TOF2YKR010C 2316 nt0.5□□□□□ -2.33
RPL40BP0CH09 SWI6YLR182W 2412 nt0.49□□□□□ -2.33
RPL40BP0CH09 KAR3YPR141C 2190 nt0.49□□□□□ -2.33
RPL40BP0CH09 CYC7YEL039C 342 nt0.49□□□□□ -2.33
RPL40BP0CH09 IES5YER092W 378 nt0.49□□□□□ -2.33
RPL40BP0CH09 YDL068WYDL068W 330 nt0.48□□□□□ -2.33
RPL40BP0CH09 RPS30AYLR287C-A 192 nt0.48□□□□□ -2.33
RPL40BP0CH09 NBP1YLR457C 960 nt0.48□□□□□ -2.33
RPL40BP0CH09 15S_rRNA15S_rRNA 1649 nt0.48□□□□□ -2.33
RPL40BP0CH09 REF2YDR195W 1602 nt0.48□□□□□ -2.33
RPL40BP0CH09 NUP82YJL061W 2142 nt0.47□□□□□ -2.33
RPL40BP0CH09 SWT1YOR166C 1377 nt0.47□□□□□ -2.33
RPL40BP0CH09 PXA2YKL188C 2562 nt0.47□□□□□ -2.33
RPL40BP0CH09 YBR063CYBR063C 1215 nt0.47□□□□□ -2.33
RPL40BP0CH09 UTP10YJL109C 5310 nt0.47□□□□□ -2.33
RPL40BP0CH09 AIM44YPL158C 2277 nt0.47□□□□□ -2.33
RPL40BP0CH09 CSE1YGL238W 2883 nt0.46□□□□□ -2.34
RPL40BP0CH09 RPS7BYNL096C 573 nt0.46□□□□□ -2.34
RPL40BP0CH09 MPT5YGL178W 2580 nt0.46□□□□□ -2.34
RPL40BP0CH09 SLY1YDR189W 2001 nt0.45□□□□□ -2.34
RPL40BP0CH09 YDR248CYDR248C 582 nt0.45□□□□□ -2.34
RPL40BP0CH09 TIM8YJR135W-A 264 nt0.45□□□□□ -2.34
RPL40BP0CH09 YPR172WYPR172W 603 nt0.45□□□□□ -2.34
RPL40BP0CH09 DAD1YDR016C 285 nt0.44□□□□□ -2.34
RPL40BP0CH09 SMB1YER029C 591 nt0.44□□□□□ -2.34
RPL40BP0CH09 RPL22BYFL034C-A 369 nt0.44□□□□□ -2.34
RPL40BP0CH09 YGR270C-AYGR270C-A 219 nt0.44□□□□□ -2.34
RPL40BP0CH09 YIL030W-AYIL030W-A 339 nt0.44□□□□□ -2.34
RPL40BP0CH09 YBR200W-AYBR200W-A 165 nt0.44□□□□□ -2.34
RPL40BP0CH09 NOC3YLR002C 1992 nt0.44□□□□□ -2.34
RPL40BP0CH09 MXR1YER042W 555 nt0.43□□□□□ -2.34
RPL40BP0CH09 DFG10YIL049W 762 nt0.43□□□□□ -2.34
RPL40BP0CH09 RPL37AYLR185W 267 nt0.43□□□□□ -2.34
RPL40BP0CH09 YPL080CYPL080C 327 nt0.43□□□□□ -2.34
RPL40BP0CH09 YPL119C-AYPL119C-A 264 nt0.43□□□□□ -2.34
RPL40BP0CH09 WAR1YML076C 2835 nt0.43□□□□□ -2.34
RPL40BP0CH09 RSM23YGL129C 1353 nt0.43□□□□□ -2.34
RPL40BP0CH09 YDL206WYDL206W 2289 nt0.43□□□□□ -2.34
RPL40BP0CH09 YGR290WYGR290W 444 nt0.42□□□□□ -2.34
RPL40BP0CH09 ARV1YLR242C 966 nt0.42□□□□□ -2.34
RPL40BP0CH09 YBR012CYBR012C 420 nt0.42□□□□□ -2.34
RPL40BP0CH09 YBR221W-AYBR221W-A 105 nt0.42□□□□□ -2.34
RPL40BP0CH09 NNF2YGR089W 2811 nt0.42□□□□□ -2.34
RPL40BP0CH09 ZIP1YDR285W 2628 nt0.41□□□□□ -2.34
RPL40BP0CH09 SRP14YDL092W 441 nt0.41□□□□□ -2.34
RPL40BP0CH09 YGL109WYGL109W 324 nt0.41□□□□□ -2.34
RPL40BP0CH09 IES4YOR189W 351 nt0.41□□□□□ -2.34
RPL40BP0CH09 SPR2YOR214C 711 nt0.41□□□□□ -2.34
RPL40BP0CH09 SAG1YJR004C 1953 nt0.41□□□□□ -2.34
RPL40BP0CH09 HDA3YPR179C 1968 nt0.41□□□□□ -2.34
RPL40BP0CH09 ENV11YGR071C 2583 nt0.41□□□□□ -2.34
RPL40BP0CH09 YOR192C-BYOR192C-B 5313 nt0.4□□□□□ -2.34
RPL40BP0CH09 RKR1YMR247C 4689 nt0.39□□□□□ -2.35
RPL40BP0CH09 SWI5YDR146C 2130 nt0.39□□□□□ -2.35
RPL40BP0CH09 YER038W-AYER038W-A 381 nt0.39□□□□□ -2.35
RPL40BP0CH09 RPL38YLR325C 237 nt0.39□□□□□ -2.35
RPL40BP0CH09 NUT2YPR168W 474 nt0.39□□□□□ -2.35
Retrieved 100 of 7,029 protein–RNA pairs in 37.3 ms