Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBCP0CG48 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBCP0CG48 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBCP0CG48 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBCP0CG48 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
UBCP0CG48 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UBCP0CG48 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.7■□□□□ 0.42
UBCP0CG48 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBCP0CG48 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
UBCP0CG48 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBCP0CG48 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
UBCP0CG48 SMG8-203ENST00000578922 2178 ntBASIC17.69■□□□□ 0.42
UBCP0CG48 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
UBCP0CG48 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.69■□□□□ 0.42
UBCP0CG48 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.69■□□□□ 0.42
UBCP0CG48 SLC7A5P1-201ENST00000568957 537 ntBASIC17.69■□□□□ 0.42
UBCP0CG48 TERF1P2-201ENST00000583350 1212 ntBASIC17.69■□□□□ 0.42
UBCP0CG48 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.69■□□□□ 0.42
UBCP0CG48 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.69■□□□□ 0.42
UBCP0CG48 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBCP0CG48 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBCP0CG48 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.69■□□□□ 0.42
UBCP0CG48 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
UBCP0CG48 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
UBCP0CG48 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBCP0CG48 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.68■□□□□ 0.42
UBCP0CG48 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBCP0CG48 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBCP0CG48 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.68■□□□□ 0.42
UBCP0CG48 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.68■□□□□ 0.42
UBCP0CG48 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.68■□□□□ 0.42
UBCP0CG48 AC087289.5-201ENST00000586076 3175 ntBASIC17.68■□□□□ 0.42
UBCP0CG48 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
UBCP0CG48 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBCP0CG48 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.68■□□□□ 0.42
UBCP0CG48 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBCP0CG48 AC091799.1-201ENST00000422823 811 ntBASIC17.68■□□□□ 0.42
UBCP0CG48 YBX1P1-201ENST00000445822 960 ntBASIC17.68■□□□□ 0.42
UBCP0CG48 KRT8P36-201ENST00000489121 1440 ntBASIC17.68■□□□□ 0.42
UBCP0CG48 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.68■□□□□ 0.42
UBCP0CG48 RBM17P2-201ENST00000616397 1405 ntBASIC17.68■□□□□ 0.42
UBCP0CG48 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.68■□□□□ 0.42
UBCP0CG48 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBCP0CG48 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBCP0CG48 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBCP0CG48 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBCP0CG48 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBCP0CG48 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBCP0CG48 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.68■□□□□ 0.42
UBCP0CG48 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBCP0CG48 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.67■□□□□ 0.42
UBCP0CG48 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBCP0CG48 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBCP0CG48 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.67■□□□□ 0.42
UBCP0CG48 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.67■□□□□ 0.42
UBCP0CG48 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
UBCP0CG48 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
UBCP0CG48 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBCP0CG48 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBCP0CG48 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBCP0CG48 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBCP0CG48 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBCP0CG48 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBCP0CG48 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBCP0CG48 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.67■□□□□ 0.42
UBCP0CG48 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.67■□□□□ 0.42
UBCP0CG48 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.67■□□□□ 0.42
UBCP0CG48 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
UBCP0CG48 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBCP0CG48 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBCP0CG48 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
UBCP0CG48 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.67■□□□□ 0.42
UBCP0CG48 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBCP0CG48 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
UBCP0CG48 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.67■□□□□ 0.42
UBCP0CG48 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBCP0CG48 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBCP0CG48 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBCP0CG48 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBCP0CG48 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBCP0CG48 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBCP0CG48 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBCP0CG48 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBCP0CG48 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.66■□□□□ 0.42
UBCP0CG48 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBCP0CG48 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
UBCP0CG48 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBCP0CG48 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.66■□□□□ 0.42
UBCP0CG48 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.66■□□□□ 0.42
UBCP0CG48 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.66■□□□□ 0.42
UBCP0CG48 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.66■□□□□ 0.42
UBCP0CG48 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
UBCP0CG48 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
UBCP0CG48 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBCP0CG48 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBCP0CG48 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBCP0CG48 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBCP0CG48 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBCP0CG48 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.66■□□□□ 0.42
UBCP0CG48 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms