Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RAB40ALP0C0E4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RAB40ALP0C0E4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.65
RAB40ALP0C0E4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RAB40ALP0C0E4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RAB40ALP0C0E4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RAB40ALP0C0E4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
RAB40ALP0C0E4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RAB40ALP0C0E4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RAB40ALP0C0E4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.08■□□□□ 0.64
RAB40ALP0C0E4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RAB40ALP0C0E4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
RAB40ALP0C0E4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
RAB40ALP0C0E4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.08■□□□□ 0.64
RAB40ALP0C0E4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.08■□□□□ 0.64
RAB40ALP0C0E4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
RAB40ALP0C0E4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.08■□□□□ 0.64
RAB40ALP0C0E4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RAB40ALP0C0E4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RAB40ALP0C0E4 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.08■□□□□ 0.64
RAB40ALP0C0E4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
RAB40ALP0C0E4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RAB40ALP0C0E4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RAB40ALP0C0E4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
RAB40ALP0C0E4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RAB40ALP0C0E4 SLC25A24-204ENST00000569674 2357 ntBASIC19.07■□□□□ 0.64
RAB40ALP0C0E4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
RAB40ALP0C0E4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB40ALP0C0E4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RAB40ALP0C0E4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
RAB40ALP0C0E4 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.07■□□□□ 0.64
RAB40ALP0C0E4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB40ALP0C0E4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.07■□□□□ 0.64
RAB40ALP0C0E4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.07■□□□□ 0.64
RAB40ALP0C0E4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB40ALP0C0E4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB40ALP0C0E4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.07■□□□□ 0.64
RAB40ALP0C0E4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB40ALP0C0E4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB40ALP0C0E4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB40ALP0C0E4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RAB40ALP0C0E4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.07■□□□□ 0.64
RAB40ALP0C0E4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB40ALP0C0E4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.06■□□□□ 0.64
RAB40ALP0C0E4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.06■□□□□ 0.64
RAB40ALP0C0E4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.06■□□□□ 0.64
RAB40ALP0C0E4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.06■□□□□ 0.64
RAB40ALP0C0E4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB40ALP0C0E4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
RAB40ALP0C0E4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB40ALP0C0E4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB40ALP0C0E4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RAB40ALP0C0E4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB40ALP0C0E4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.06■□□□□ 0.64
RAB40ALP0C0E4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RAB40ALP0C0E4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RAB40ALP0C0E4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.06■□□□□ 0.64
RAB40ALP0C0E4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.06■□□□□ 0.64
RAB40ALP0C0E4 MTDHP1-201ENST00000605323 784 ntBASIC19.06■□□□□ 0.64
RAB40ALP0C0E4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RAB40ALP0C0E4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB40ALP0C0E4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB40ALP0C0E4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB40ALP0C0E4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RAB40ALP0C0E4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.06■□□□□ 0.64
RAB40ALP0C0E4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB40ALP0C0E4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RAB40ALP0C0E4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.06■□□□□ 0.64
RAB40ALP0C0E4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.06■□□□□ 0.64
RAB40ALP0C0E4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.05■□□□□ 0.64
RAB40ALP0C0E4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB40ALP0C0E4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RAB40ALP0C0E4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB40ALP0C0E4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB40ALP0C0E4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.05■□□□□ 0.64
RAB40ALP0C0E4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
RAB40ALP0C0E4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB40ALP0C0E4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RAB40ALP0C0E4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB40ALP0C0E4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.05■□□□□ 0.64
RAB40ALP0C0E4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB40ALP0C0E4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.05■□□□□ 0.64
RAB40ALP0C0E4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RAB40ALP0C0E4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.05■□□□□ 0.64
RAB40ALP0C0E4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.05■□□□□ 0.64
RAB40ALP0C0E4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB40ALP0C0E4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB40ALP0C0E4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
RAB40ALP0C0E4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
RAB40ALP0C0E4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.04■□□□□ 0.64
RAB40ALP0C0E4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.04■□□□□ 0.64
RAB40ALP0C0E4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
RAB40ALP0C0E4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
RAB40ALP0C0E4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.04■□□□□ 0.64
RAB40ALP0C0E4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAB40ALP0C0E4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.04■□□□□ 0.64
RAB40ALP0C0E4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB40ALP0C0E4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB40ALP0C0E4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RAB40ALP0C0E4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms