Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
HLA-DOAP06340 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC23.93■■□□□ 1.42
HLA-DOAP06340 AC124016.1-201ENST00000609552 612 ntBASIC23.93■■□□□ 1.42
HLA-DOAP06340 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
HLA-DOAP06340 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
HLA-DOAP06340 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
HLA-DOAP06340 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
HLA-DOAP06340 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.92■■□□□ 1.42
HLA-DOAP06340 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
HLA-DOAP06340 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.92■■□□□ 1.42
HLA-DOAP06340 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
HLA-DOAP06340 SERF2-207ENST00000409614 582 ntTSL 2 BASIC23.92■■□□□ 1.42
HLA-DOAP06340 AC133681.1-201ENST00000465482 601 ntBASIC23.92■■□□□ 1.42
HLA-DOAP06340 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
HLA-DOAP06340 HES2-206ENST00000489730 730 ntTSL 2 BASIC23.92■■□□□ 1.42
HLA-DOAP06340 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC23.92■■□□□ 1.42
HLA-DOAP06340 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC23.92■■□□□ 1.42
HLA-DOAP06340 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC23.92■■□□□ 1.42
HLA-DOAP06340 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
HLA-DOAP06340 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC23.92■■□□□ 1.42
HLA-DOAP06340 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
HLA-DOAP06340 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
HLA-DOAP06340 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
HLA-DOAP06340 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
HLA-DOAP06340 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
HLA-DOAP06340 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
HLA-DOAP06340 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
HLA-DOAP06340 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
HLA-DOAP06340 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
HLA-DOAP06340 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
HLA-DOAP06340 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
HLA-DOAP06340 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
HLA-DOAP06340 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
HLA-DOAP06340 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC23.91■■□□□ 1.42
HLA-DOAP06340 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
HLA-DOAP06340 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC23.91■■□□□ 1.42
HLA-DOAP06340 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
HLA-DOAP06340 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
HLA-DOAP06340 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC23.91■■□□□ 1.42
HLA-DOAP06340 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.9■■□□□ 1.42
HLA-DOAP06340 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
HLA-DOAP06340 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC23.9■■□□□ 1.42
HLA-DOAP06340 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
HLA-DOAP06340 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
HLA-DOAP06340 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC23.9■■□□□ 1.42
HLA-DOAP06340 PRKY-204ENST00000533551 1019 ntBASIC23.9■■□□□ 1.42
HLA-DOAP06340 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC23.9■■□□□ 1.42
HLA-DOAP06340 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC23.9■■□□□ 1.42
HLA-DOAP06340 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
HLA-DOAP06340 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
HLA-DOAP06340 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC23.9■■□□□ 1.42
HLA-DOAP06340 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.89■■□□□ 1.42
HLA-DOAP06340 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC23.89■■□□□ 1.42
HLA-DOAP06340 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
HLA-DOAP06340 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
HLA-DOAP06340 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC23.89■■□□□ 1.42
HLA-DOAP06340 KRASP1-201ENST00000407852 552 ntBASIC23.89■■□□□ 1.41
HLA-DOAP06340 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC23.89■■□□□ 1.41
HLA-DOAP06340 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC23.89■■□□□ 1.41
HLA-DOAP06340 Z99916.2-201ENST00000604037 246 ntBASIC23.89■■□□□ 1.41
HLA-DOAP06340 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
HLA-DOAP06340 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
HLA-DOAP06340 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.89■■□□□ 1.41
HLA-DOAP06340 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
HLA-DOAP06340 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC23.89■■□□□ 1.41
HLA-DOAP06340 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
HLA-DOAP06340 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
HLA-DOAP06340 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
HLA-DOAP06340 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC23.89■■□□□ 1.41
HLA-DOAP06340 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
HLA-DOAP06340 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
HLA-DOAP06340 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
HLA-DOAP06340 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.88■■□□□ 1.41
HLA-DOAP06340 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
HLA-DOAP06340 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC23.88■■□□□ 1.41
HLA-DOAP06340 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC23.88■■□□□ 1.41
HLA-DOAP06340 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
HLA-DOAP06340 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
HLA-DOAP06340 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC23.88■■□□□ 1.41
HLA-DOAP06340 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC23.88■■□□□ 1.41
HLA-DOAP06340 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC23.88■■□□□ 1.41
HLA-DOAP06340 AC110285.5-201ENST00000611501 352 ntBASIC23.88■■□□□ 1.41
HLA-DOAP06340 ERF-202ENST00000440177 2032 ntTSL 2 BASIC23.88■■□□□ 1.41
HLA-DOAP06340 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
HLA-DOAP06340 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
HLA-DOAP06340 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC23.87■■□□□ 1.41
HLA-DOAP06340 PLK5-205ENST00000642079 1969 ntBASIC23.87■■□□□ 1.41
HLA-DOAP06340 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
HLA-DOAP06340 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
HLA-DOAP06340 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC23.87■■□□□ 1.41
HLA-DOAP06340 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC23.87■■□□□ 1.41
HLA-DOAP06340 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
HLA-DOAP06340 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
HLA-DOAP06340 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
HLA-DOAP06340 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HLA-DOAP06340 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HLA-DOAP06340 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
HLA-DOAP06340 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
HLA-DOAP06340 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HLA-DOAP06340 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms