Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.55■□□□□ 0.88
HLA-DQB2P05538 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.55■□□□□ 0.88
HLA-DQB2P05538 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.55■□□□□ 0.88
HLA-DQB2P05538 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
HLA-DQB2P05538 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DQB2P05538 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
HLA-DQB2P05538 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DQB2P05538 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DQB2P05538 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.54■□□□□ 0.88
HLA-DQB2P05538 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.54■□□□□ 0.88
HLA-DQB2P05538 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DQB2P05538 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DQB2P05538 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DQB2P05538 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
HLA-DQB2P05538 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.54■□□□□ 0.88
HLA-DQB2P05538 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.54■□□□□ 0.88
HLA-DQB2P05538 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.54■□□□□ 0.88
HLA-DQB2P05538 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
HLA-DQB2P05538 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.54■□□□□ 0.88
HLA-DQB2P05538 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
HLA-DQB2P05538 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DQB2P05538 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DQB2P05538 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DQB2P05538 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DQB2P05538 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DQB2P05538 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.53■□□□□ 0.88
HLA-DQB2P05538 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DQB2P05538 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DQB2P05538 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.53■□□□□ 0.88
HLA-DQB2P05538 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.53■□□□□ 0.88
HLA-DQB2P05538 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.53■□□□□ 0.88
HLA-DQB2P05538 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
HLA-DQB2P05538 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.53■□□□□ 0.88
HLA-DQB2P05538 SLC29A4P1-201ENST00000398760 971 ntBASIC20.53■□□□□ 0.88
HLA-DQB2P05538 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DQB2P05538 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.53■□□□□ 0.88
HLA-DQB2P05538 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DQB2P05538 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DQB2P05538 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DQB2P05538 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
HLA-DQB2P05538 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
HLA-DQB2P05538 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HLA-DQB2P05538 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.52■□□□□ 0.88
HLA-DQB2P05538 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HLA-DQB2P05538 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
HLA-DQB2P05538 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
HLA-DQB2P05538 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.52■□□□□ 0.88
HLA-DQB2P05538 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HLA-DQB2P05538 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
HLA-DQB2P05538 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.52■□□□□ 0.88
HLA-DQB2P05538 AL109923.1-201ENST00000618799 583 ntBASIC20.52■□□□□ 0.88
HLA-DQB2P05538 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.52■□□□□ 0.88
HLA-DQB2P05538 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
HLA-DQB2P05538 AL391422.3-201ENST00000603791 2761 ntBASIC20.52■□□□□ 0.88
HLA-DQB2P05538 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.52■□□□□ 0.88
HLA-DQB2P05538 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.52■□□□□ 0.88
HLA-DQB2P05538 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.52■□□□□ 0.88
HLA-DQB2P05538 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HLA-DQB2P05538 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
HLA-DQB2P05538 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HLA-DQB2P05538 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.52■□□□□ 0.87
HLA-DQB2P05538 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
HLA-DQB2P05538 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
HLA-DQB2P05538 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.51■□□□□ 0.87
HLA-DQB2P05538 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DQB2P05538 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
HLA-DQB2P05538 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DQB2P05538 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DQB2P05538 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DQB2P05538 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DQB2P05538 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DQB2P05538 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.51■□□□□ 0.87
HLA-DQB2P05538 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DQB2P05538 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.51■□□□□ 0.87
HLA-DQB2P05538 AC104771.1-201ENST00000603335 964 ntBASIC20.51■□□□□ 0.87
HLA-DQB2P05538 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DQB2P05538 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DQB2P05538 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DQB2P05538 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DQB2P05538 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.51■□□□□ 0.87
HLA-DQB2P05538 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.51■□□□□ 0.87
HLA-DQB2P05538 AC099778.1-201ENST00000568593 1911 ntBASIC20.51■□□□□ 0.87
HLA-DQB2P05538 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.51■□□□□ 0.87
HLA-DQB2P05538 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HLA-DQB2P05538 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.5■□□□□ 0.87
HLA-DQB2P05538 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HLA-DQB2P05538 PTBP1P-201ENST00000554374 1601 ntBASIC20.5■□□□□ 0.87
HLA-DQB2P05538 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.5■□□□□ 0.87
HLA-DQB2P05538 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
HLA-DQB2P05538 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
HLA-DQB2P05538 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.5■□□□□ 0.87
HLA-DQB2P05538 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
HLA-DQB2P05538 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.5■□□□□ 0.87
HLA-DQB2P05538 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.5■□□□□ 0.87
HLA-DQB2P05538 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.5■□□□□ 0.87
HLA-DQB2P05538 C2orf69P4-201ENST00000565394 541 ntBASIC20.5■□□□□ 0.87
HLA-DQB2P05538 AL138781.1-201ENST00000566567 1274 ntBASIC20.5■□□□□ 0.87
HLA-DQB2P05538 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
HLA-DQB2P05538 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
HLA-DQB2P05538 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms