Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
CD74P04233 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.98■□□□□ 0.31
CD74P04233 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD74P04233 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD74P04233 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD74P04233 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD74P04233 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD74P04233 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CD74P04233 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD74P04233 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CD74P04233 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD74P04233 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.97■□□□□ 0.31
CD74P04233 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD74P04233 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.97■□□□□ 0.31
CD74P04233 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
CD74P04233 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD74P04233 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD74P04233 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.97■□□□□ 0.31
CD74P04233 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.97■□□□□ 0.31
CD74P04233 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD74P04233 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD74P04233 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
CD74P04233 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD74P04233 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD74P04233 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD74P04233 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.97■□□□□ 0.31
CD74P04233 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.97■□□□□ 0.31
CD74P04233 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.97■□□□□ 0.31
CD74P04233 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CD74P04233 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CD74P04233 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD74P04233 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CD74P04233 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD74P04233 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD74P04233 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD74P04233 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD74P04233 LHPP-203ENST00000392757 840 ntTSL 3 BASIC16.96■□□□□ 0.31
CD74P04233 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CD74P04233 MFF-208ENST00000409616 1247 ntTSL 5 BASIC16.96■□□□□ 0.31
CD74P04233 AC245052.3-201ENST00000450182 901 ntBASIC16.96■□□□□ 0.31
CD74P04233 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CD74P04233 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CD74P04233 MIR4466-201ENST00000606121 54 ntBASIC16.96■□□□□ 0.31
CD74P04233 AC233992.3-201ENST00000607491 485 ntBASIC16.96■□□□□ 0.31
CD74P04233 AC008175.2-201ENST00000612840 297 ntBASIC16.96■□□□□ 0.31
CD74P04233 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC16.96■□□□□ 0.31
CD74P04233 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC16.96■□□□□ 0.31
CD74P04233 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC16.96■□□□□ 0.31
CD74P04233 AC105233.4-201ENST00000642045 216 ntBASIC16.96■□□□□ 0.31
CD74P04233 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD74P04233 AC116050.2-201ENST00000612102 1779 ntBASIC16.96■□□□□ 0.31
CD74P04233 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD74P04233 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.96■□□□□ 0.31
CD74P04233 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.96■□□□□ 0.31
CD74P04233 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CD74P04233 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD74P04233 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD74P04233 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CD74P04233 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CD74P04233 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.96■□□□□ 0.3
CD74P04233 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CD74P04233 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
CD74P04233 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.96■□□□□ 0.3
CD74P04233 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.96■□□□□ 0.3
CD74P04233 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CD74P04233 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CD74P04233 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CD74P04233 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CD74P04233 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD74P04233 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.95■□□□□ 0.3
CD74P04233 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CD74P04233 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD74P04233 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CD74P04233 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CD74P04233 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD74P04233 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CD74P04233 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC16.95■□□□□ 0.3
CD74P04233 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC16.95■□□□□ 0.3
CD74P04233 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC16.95■□□□□ 0.3
CD74P04233 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CD74P04233 GRAMD4P7-201ENST00000578182 1232 ntBASIC16.95■□□□□ 0.3
CD74P04233 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD74P04233 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.95■□□□□ 0.3
CD74P04233 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD74P04233 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CD74P04233 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD74P04233 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CD74P04233 KRT8P36-201ENST00000489121 1440 ntBASIC16.95■□□□□ 0.3
CD74P04233 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD74P04233 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CD74P04233 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD74P04233 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD74P04233 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD74P04233 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.94■□□□□ 0.3
CD74P04233 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD74P04233 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CD74P04233 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC16.94■□□□□ 0.3
CD74P04233 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CD74P04233 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.94■□□□□ 0.3
CD74P04233 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms