Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.88■□□□□ 0.61
PDGFAP04085 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.88■□□□□ 0.61
PDGFAP04085 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.88■□□□□ 0.61
PDGFAP04085 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
PDGFAP04085 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDGFAP04085 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDGFAP04085 RPS2P55-201ENST00000397318 883 ntBASIC18.88■□□□□ 0.61
PDGFAP04085 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.88■□□□□ 0.61
PDGFAP04085 AC107956.1-201ENST00000494359 873 ntBASIC18.88■□□□□ 0.61
PDGFAP04085 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.88■□□□□ 0.61
PDGFAP04085 AC233702.5-201ENST00000584107 538 ntBASIC18.88■□□□□ 0.61
PDGFAP04085 MTDHP1-201ENST00000605323 784 ntBASIC18.88■□□□□ 0.61
PDGFAP04085 AC010331.1-201ENST00000611423 582 ntBASIC18.88■□□□□ 0.61
PDGFAP04085 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDGFAP04085 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
PDGFAP04085 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PDGFAP04085 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.88■□□□□ 0.61
PDGFAP04085 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDGFAP04085 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDGFAP04085 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDGFAP04085 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDGFAP04085 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PDGFAP04085 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDGFAP04085 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDGFAP04085 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDGFAP04085 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDGFAP04085 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDGFAP04085 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PDGFAP04085 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDGFAP04085 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDGFAP04085 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDGFAP04085 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDGFAP04085 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
PDGFAP04085 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDGFAP04085 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.87■□□□□ 0.61
PDGFAP04085 AC012618.2-201ENST00000428058 849 ntBASIC18.87■□□□□ 0.61
PDGFAP04085 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDGFAP04085 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDGFAP04085 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDGFAP04085 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.87■□□□□ 0.61
PDGFAP04085 KRT18P21-201ENST00000515767 1272 ntBASIC18.87■□□□□ 0.61
PDGFAP04085 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
PDGFAP04085 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.87■□□□□ 0.61
PDGFAP04085 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDGFAP04085 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
PDGFAP04085 LINC01023-201ENST00000606054 436 ntBASIC18.87■□□□□ 0.61
PDGFAP04085 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PDGFAP04085 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.87■□□□□ 0.61
PDGFAP04085 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDGFAP04085 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDGFAP04085 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.86■□□□□ 0.61
PDGFAP04085 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDGFAP04085 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.86■□□□□ 0.61
PDGFAP04085 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDGFAP04085 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PDGFAP04085 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDGFAP04085 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDGFAP04085 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDGFAP04085 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDGFAP04085 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PDGFAP04085 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.86■□□□□ 0.61
PDGFAP04085 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
PDGFAP04085 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.86■□□□□ 0.61
PDGFAP04085 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDGFAP04085 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.86■□□□□ 0.61
PDGFAP04085 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.86■□□□□ 0.61
PDGFAP04085 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PDGFAP04085 AC124016.1-201ENST00000609552 612 ntBASIC18.86■□□□□ 0.61
PDGFAP04085 AL023875.1-201ENST00000640777 796 ntBASIC18.86■□□□□ 0.61
PDGFAP04085 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDGFAP04085 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDGFAP04085 FAM99A-202ENST00000538190 1989 ntBASIC18.86■□□□□ 0.61
PDGFAP04085 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PDGFAP04085 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDGFAP04085 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDGFAP04085 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PDGFAP04085 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.85■□□□□ 0.61
PDGFAP04085 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.85■□□□□ 0.61
PDGFAP04085 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDGFAP04085 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PDGFAP04085 TSPY15P-201ENST00000457163 923 ntBASIC18.85■□□□□ 0.61
PDGFAP04085 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.85■□□□□ 0.61
PDGFAP04085 C2orf69P4-201ENST00000565394 541 ntBASIC18.85■□□□□ 0.61
PDGFAP04085 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDGFAP04085 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDGFAP04085 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PDGFAP04085 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDGFAP04085 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.85■□□□□ 0.61
PDGFAP04085 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDGFAP04085 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PDGFAP04085 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PDGFAP04085 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PDGFAP04085 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDGFAP04085 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.85■□□□□ 0.61
PDGFAP04085 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.85■□□□□ 0.61
PDGFAP04085 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDGFAP04085 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDGFAP04085 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDGFAP04085 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDGFAP04085 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms