Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
HLA-DRAP01903 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
HLA-DRAP01903 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
HLA-DRAP01903 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.78■■□□□ 1.08
HLA-DRAP01903 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HLA-DRAP01903 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.78■■□□□ 1.08
HLA-DRAP01903 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.77■■□□□ 1.08
HLA-DRAP01903 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
HLA-DRAP01903 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HLA-DRAP01903 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HLA-DRAP01903 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.77■■□□□ 1.08
HLA-DRAP01903 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
HLA-DRAP01903 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
HLA-DRAP01903 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HLA-DRAP01903 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
HLA-DRAP01903 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.77■■□□□ 1.08
HLA-DRAP01903 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.77■■□□□ 1.08
HLA-DRAP01903 DUSP5P2-201ENST00000426873 1033 ntBASIC21.77■■□□□ 1.08
HLA-DRAP01903 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.77■■□□□ 1.08
HLA-DRAP01903 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.77■■□□□ 1.08
HLA-DRAP01903 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.77■■□□□ 1.08
HLA-DRAP01903 MIR4758-201ENST00000577688 71 ntBASIC21.77■■□□□ 1.08
HLA-DRAP01903 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.77■■□□□ 1.08
HLA-DRAP01903 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HLA-DRAP01903 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HLA-DRAP01903 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HLA-DRAP01903 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.77■■□□□ 1.07
HLA-DRAP01903 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
HLA-DRAP01903 AL162377.1-201ENST00000618844 1793 ntBASIC21.76■■□□□ 1.07
HLA-DRAP01903 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
HLA-DRAP01903 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.76■■□□□ 1.07
HLA-DRAP01903 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HLA-DRAP01903 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
HLA-DRAP01903 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
HLA-DRAP01903 AC142086.2-201ENST00000569753 217 ntBASIC21.76■■□□□ 1.07
HLA-DRAP01903 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
HLA-DRAP01903 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HLA-DRAP01903 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HLA-DRAP01903 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.76■■□□□ 1.07
HLA-DRAP01903 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.76■■□□□ 1.07
HLA-DRAP01903 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.76■■□□□ 1.07
HLA-DRAP01903 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HLA-DRAP01903 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
HLA-DRAP01903 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
HLA-DRAP01903 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
HLA-DRAP01903 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
HLA-DRAP01903 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.75■■□□□ 1.07
HLA-DRAP01903 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HLA-DRAP01903 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
HLA-DRAP01903 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HLA-DRAP01903 AC091874.3-201ENST00000512672 1195 ntBASIC21.75■■□□□ 1.07
HLA-DRAP01903 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.75■■□□□ 1.07
HLA-DRAP01903 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.75■■□□□ 1.07
HLA-DRAP01903 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.75■■□□□ 1.07
HLA-DRAP01903 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HLA-DRAP01903 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.75■■□□□ 1.07
HLA-DRAP01903 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
HLA-DRAP01903 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HLA-DRAP01903 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HLA-DRAP01903 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
HLA-DRAP01903 AL355802.2-201ENST00000402069 882 ntBASIC21.74■■□□□ 1.07
HLA-DRAP01903 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HLA-DRAP01903 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
HLA-DRAP01903 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HLA-DRAP01903 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HLA-DRAP01903 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
HLA-DRAP01903 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.74■■□□□ 1.07
HLA-DRAP01903 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HLA-DRAP01903 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HLA-DRAP01903 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HLA-DRAP01903 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HLA-DRAP01903 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
HLA-DRAP01903 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
HLA-DRAP01903 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
HLA-DRAP01903 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.73■■□□□ 1.07
HLA-DRAP01903 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
HLA-DRAP01903 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.73■■□□□ 1.07
HLA-DRAP01903 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.73■■□□□ 1.07
HLA-DRAP01903 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.73■■□□□ 1.07
HLA-DRAP01903 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
HLA-DRAP01903 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HLA-DRAP01903 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.73■■□□□ 1.07
HLA-DRAP01903 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HLA-DRAP01903 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HLA-DRAP01903 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HLA-DRAP01903 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HLA-DRAP01903 PTBP1P-201ENST00000554374 1601 ntBASIC21.73■■□□□ 1.07
HLA-DRAP01903 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HLA-DRAP01903 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HLA-DRAP01903 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.72■■□□□ 1.07
HLA-DRAP01903 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
HLA-DRAP01903 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
HLA-DRAP01903 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HLA-DRAP01903 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HLA-DRAP01903 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
HLA-DRAP01903 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.72■■□□□ 1.07
HLA-DRAP01903 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
HLA-DRAP01903 MYC-209ENST00000641252 345 ntBASIC21.72■■□□□ 1.07
HLA-DRAP01903 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HLA-DRAP01903 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms