Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALX3O95076 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ALX3O95076 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.81■□□□□ 0.44
ALX3O95076 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALX3O95076 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
ALX3O95076 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ALX3O95076 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ALX3O95076 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ALX3O95076 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
ALX3O95076 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ALX3O95076 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ALX3O95076 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ALX3O95076 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.8■□□□□ 0.44
ALX3O95076 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ALX3O95076 SUDS3P1-201ENST00000505831 966 ntBASIC17.8■□□□□ 0.44
ALX3O95076 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.8■□□□□ 0.44
ALX3O95076 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.8■□□□□ 0.44
ALX3O95076 AC008175.2-201ENST00000612840 297 ntBASIC17.8■□□□□ 0.44
ALX3O95076 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ALX3O95076 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
ALX3O95076 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.8■□□□□ 0.44
ALX3O95076 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.8■□□□□ 0.44
ALX3O95076 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.8■□□□□ 0.44
ALX3O95076 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ALX3O95076 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
ALX3O95076 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ALX3O95076 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
ALX3O95076 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.8■□□□□ 0.44
ALX3O95076 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ALX3O95076 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ALX3O95076 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ALX3O95076 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
ALX3O95076 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALX3O95076 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALX3O95076 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALX3O95076 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALX3O95076 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALX3O95076 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALX3O95076 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.79■□□□□ 0.44
ALX3O95076 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.79■□□□□ 0.44
ALX3O95076 AC020907.5-201ENST00000624372 1936 ntBASIC17.79■□□□□ 0.44
ALX3O95076 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALX3O95076 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.79■□□□□ 0.44
ALX3O95076 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALX3O95076 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.79■□□□□ 0.44
ALX3O95076 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.79■□□□□ 0.44
ALX3O95076 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.79■□□□□ 0.44
ALX3O95076 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.79■□□□□ 0.44
ALX3O95076 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALX3O95076 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ALX3O95076 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ALX3O95076 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ALX3O95076 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ALX3O95076 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALX3O95076 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ALX3O95076 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALX3O95076 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ALX3O95076 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ALX3O95076 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ALX3O95076 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALX3O95076 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ALX3O95076 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ALX3O95076 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.78■□□□□ 0.44
ALX3O95076 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALX3O95076 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.78■□□□□ 0.44
ALX3O95076 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ALX3O95076 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALX3O95076 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALX3O95076 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ALX3O95076 AL032819.2-201ENST00000624543 2162 ntBASIC17.78■□□□□ 0.44
ALX3O95076 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALX3O95076 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALX3O95076 AC061975.6-201ENST00000579045 1553 ntBASIC17.78■□□□□ 0.44
ALX3O95076 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ALX3O95076 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALX3O95076 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALX3O95076 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALX3O95076 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.78■□□□□ 0.44
ALX3O95076 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.77■□□□□ 0.44
ALX3O95076 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ALX3O95076 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
ALX3O95076 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
ALX3O95076 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ALX3O95076 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
ALX3O95076 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.77■□□□□ 0.44
ALX3O95076 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.77■□□□□ 0.44
ALX3O95076 AC027702.1-201ENST00000563810 1770 ntBASIC17.77■□□□□ 0.44
ALX3O95076 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
ALX3O95076 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ALX3O95076 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ALX3O95076 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.77■□□□□ 0.44
ALX3O95076 AC142381.2-201ENST00000566120 298 ntBASIC17.77■□□□□ 0.44
ALX3O95076 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.77■□□□□ 0.44
ALX3O95076 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ALX3O95076 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
ALX3O95076 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ALX3O95076 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ALX3O95076 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
ALX3O95076 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ALX3O95076 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms