Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
SNRNP200O75643 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNRNP200O75643 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.4■□□□□ 0.7
SNRNP200O75643 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNRNP200O75643 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SNRNP200O75643 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
SNRNP200O75643 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SNRNP200O75643 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.7
SNRNP200O75643 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SNRNP200O75643 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SNRNP200O75643 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
SNRNP200O75643 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.39■□□□□ 0.69
SNRNP200O75643 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.39■□□□□ 0.69
SNRNP200O75643 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNRNP200O75643 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.39■□□□□ 0.69
SNRNP200O75643 POM121L13P-201ENST00000422362 380 ntBASIC19.39■□□□□ 0.69
SNRNP200O75643 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNRNP200O75643 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SNRNP200O75643 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNRNP200O75643 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SNRNP200O75643 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.39■□□□□ 0.69
SNRNP200O75643 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNRNP200O75643 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNRNP200O75643 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.39■□□□□ 0.69
SNRNP200O75643 ITM2C-210ENST00000620962 501 ntBASIC19.39■□□□□ 0.69
SNRNP200O75643 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNRNP200O75643 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
SNRNP200O75643 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNRNP200O75643 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.38■□□□□ 0.69
SNRNP200O75643 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SNRNP200O75643 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.38■□□□□ 0.69
SNRNP200O75643 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNRNP200O75643 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNRNP200O75643 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNRNP200O75643 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNRNP200O75643 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNRNP200O75643 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.38■□□□□ 0.69
SNRNP200O75643 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNRNP200O75643 AC098590.1-201ENST00000468126 897 ntBASIC19.38■□□□□ 0.69
SNRNP200O75643 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.38■□□□□ 0.69
SNRNP200O75643 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.38■□□□□ 0.69
SNRNP200O75643 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.38■□□□□ 0.69
SNRNP200O75643 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SNRNP200O75643 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.38■□□□□ 0.69
SNRNP200O75643 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNRNP200O75643 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SNRNP200O75643 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNRNP200O75643 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNRNP200O75643 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNRNP200O75643 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SNRNP200O75643 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNRNP200O75643 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNRNP200O75643 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
SNRNP200O75643 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNRNP200O75643 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNRNP200O75643 AC026366.1-201ENST00000488803 879 ntBASIC19.37■□□□□ 0.69
SNRNP200O75643 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNRNP200O75643 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNRNP200O75643 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.37■□□□□ 0.69
SNRNP200O75643 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.37■□□□□ 0.69
SNRNP200O75643 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNRNP200O75643 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNRNP200O75643 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNRNP200O75643 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNRNP200O75643 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.37■□□□□ 0.69
SNRNP200O75643 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SNRNP200O75643 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNRNP200O75643 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.37■□□□□ 0.69
SNRNP200O75643 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNRNP200O75643 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNRNP200O75643 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNRNP200O75643 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNRNP200O75643 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNRNP200O75643 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNRNP200O75643 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SNRNP200O75643 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SNRNP200O75643 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNRNP200O75643 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.36■□□□□ 0.69
SNRNP200O75643 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.36■□□□□ 0.69
SNRNP200O75643 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.36■□□□□ 0.69
SNRNP200O75643 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
SNRNP200O75643 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNRNP200O75643 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.36■□□□□ 0.69
SNRNP200O75643 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNRNP200O75643 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNRNP200O75643 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SNRNP200O75643 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.36■□□□□ 0.69
SNRNP200O75643 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.36■□□□□ 0.69
SNRNP200O75643 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNRNP200O75643 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.36■□□□□ 0.69
SNRNP200O75643 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SNRNP200O75643 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNRNP200O75643 AC233263.1-201ENST00000578059 224 ntBASIC19.36■□□□□ 0.69
SNRNP200O75643 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.36■□□□□ 0.69
SNRNP200O75643 SMG8-203ENST00000578922 2178 ntBASIC19.36■□□□□ 0.69
SNRNP200O75643 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNRNP200O75643 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNRNP200O75643 AC124283.5-201ENST00000624661 1809 ntBASIC19.35■□□□□ 0.69
SNRNP200O75643 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.35■□□□□ 0.69
SNRNP200O75643 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms