Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNOT3O75175 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CNOT3O75175 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNOT3O75175 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNOT3O75175 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNOT3O75175 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.52■□□□□ 0.72
CNOT3O75175 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CNOT3O75175 FAM21FP-204ENST00000608637 956 ntBASIC19.52■□□□□ 0.72
CNOT3O75175 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNOT3O75175 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CNOT3O75175 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.52■□□□□ 0.72
CNOT3O75175 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.52■□□□□ 0.71
CNOT3O75175 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CNOT3O75175 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CNOT3O75175 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.52■□□□□ 0.71
CNOT3O75175 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CNOT3O75175 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CNOT3O75175 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
CNOT3O75175 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNOT3O75175 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.51■□□□□ 0.71
CNOT3O75175 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
CNOT3O75175 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNOT3O75175 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNOT3O75175 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CNOT3O75175 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.51■□□□□ 0.71
CNOT3O75175 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.51■□□□□ 0.71
CNOT3O75175 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.51■□□□□ 0.71
CNOT3O75175 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNOT3O75175 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNOT3O75175 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.51■□□□□ 0.71
CNOT3O75175 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
CNOT3O75175 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CNOT3O75175 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNOT3O75175 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CNOT3O75175 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CNOT3O75175 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNOT3O75175 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNOT3O75175 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CNOT3O75175 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNOT3O75175 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNOT3O75175 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.5■□□□□ 0.71
CNOT3O75175 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CNOT3O75175 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNOT3O75175 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CNOT3O75175 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNOT3O75175 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNOT3O75175 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CNOT3O75175 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.5■□□□□ 0.71
CNOT3O75175 AC091874.3-201ENST00000512672 1195 ntBASIC19.5■□□□□ 0.71
CNOT3O75175 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.5■□□□□ 0.71
CNOT3O75175 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.5■□□□□ 0.71
CNOT3O75175 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.5■□□□□ 0.71
CNOT3O75175 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.5■□□□□ 0.71
CNOT3O75175 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNOT3O75175 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNOT3O75175 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNOT3O75175 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNOT3O75175 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNOT3O75175 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CNOT3O75175 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CNOT3O75175 KRT17P1-201ENST00000399211 1546 ntBASIC19.5■□□□□ 0.71
CNOT3O75175 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.5■□□□□ 0.71
CNOT3O75175 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.5■□□□□ 0.71
CNOT3O75175 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
CNOT3O75175 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CNOT3O75175 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
CNOT3O75175 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.49■□□□□ 0.71
CNOT3O75175 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CNOT3O75175 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CNOT3O75175 DUSP5P2-201ENST00000426873 1033 ntBASIC19.49■□□□□ 0.71
CNOT3O75175 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CNOT3O75175 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.49■□□□□ 0.71
CNOT3O75175 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.49■□□□□ 0.71
CNOT3O75175 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.49■□□□□ 0.71
CNOT3O75175 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CNOT3O75175 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
CNOT3O75175 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CNOT3O75175 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.49■□□□□ 0.71
CNOT3O75175 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNOT3O75175 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNOT3O75175 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CNOT3O75175 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.49■□□□□ 0.71
CNOT3O75175 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNOT3O75175 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNOT3O75175 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.48■□□□□ 0.71
CNOT3O75175 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNOT3O75175 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.48■□□□□ 0.71
CNOT3O75175 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.48■□□□□ 0.71
CNOT3O75175 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.48■□□□□ 0.71
CNOT3O75175 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.48■□□□□ 0.71
CNOT3O75175 CDV3P1-201ENST00000471403 739 ntBASIC19.48■□□□□ 0.71
CNOT3O75175 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.48■□□□□ 0.71
CNOT3O75175 RNA5SP413-201ENST00000516373 109 ntBASIC19.48■□□□□ 0.71
CNOT3O75175 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CNOT3O75175 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.48■□□□□ 0.71
CNOT3O75175 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.48■□□□□ 0.71
CNOT3O75175 TMEM191A-211ENST00000637163 1067 ntBASIC19.48■□□□□ 0.71
CNOT3O75175 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
CNOT3O75175 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
CNOT3O75175 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms