Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.16■□□□□ 0.66
SCN2BO60939 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SCN2BO60939 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SCN2BO60939 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SCN2BO60939 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN2BO60939 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.15■□□□□ 0.66
SCN2BO60939 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN2BO60939 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCN2BO60939 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SCN2BO60939 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN2BO60939 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SCN2BO60939 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN2BO60939 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCN2BO60939 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.15■□□□□ 0.66
SCN2BO60939 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN2BO60939 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.15■□□□□ 0.66
SCN2BO60939 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.15■□□□□ 0.66
SCN2BO60939 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCN2BO60939 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.15■□□□□ 0.66
SCN2BO60939 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.15■□□□□ 0.66
SCN2BO60939 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.15■□□□□ 0.66
SCN2BO60939 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.15■□□□□ 0.66
SCN2BO60939 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN2BO60939 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN2BO60939 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SCN2BO60939 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SCN2BO60939 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SCN2BO60939 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.14■□□□□ 0.66
SCN2BO60939 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.14■□□□□ 0.66
SCN2BO60939 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.14■□□□□ 0.66
SCN2BO60939 AC007952.6-201ENST00000573168 2673 ntBASIC19.14■□□□□ 0.65
SCN2BO60939 AC003957.1-201ENST00000625108 2673 ntBASIC19.14■□□□□ 0.65
SCN2BO60939 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SCN2BO60939 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.14■□□□□ 0.65
SCN2BO60939 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCN2BO60939 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SCN2BO60939 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.14■□□□□ 0.65
SCN2BO60939 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.14■□□□□ 0.65
SCN2BO60939 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SCN2BO60939 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.14■□□□□ 0.65
SCN2BO60939 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SCN2BO60939 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SCN2BO60939 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.14■□□□□ 0.65
SCN2BO60939 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SCN2BO60939 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.14■□□□□ 0.65
SCN2BO60939 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCN2BO60939 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCN2BO60939 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.14■□□□□ 0.65
SCN2BO60939 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCN2BO60939 DPP3P2-201ENST00000416030 1696 ntBASIC19.14■□□□□ 0.65
SCN2BO60939 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SCN2BO60939 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SCN2BO60939 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCN2BO60939 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SCN2BO60939 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCN2BO60939 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCN2BO60939 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SCN2BO60939 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SCN2BO60939 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCN2BO60939 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.13■□□□□ 0.65
SCN2BO60939 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCN2BO60939 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SCN2BO60939 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCN2BO60939 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SCN2BO60939 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SCN2BO60939 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SCN2BO60939 CDV3P1-201ENST00000471403 739 ntBASIC19.13■□□□□ 0.65
SCN2BO60939 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.13■□□□□ 0.65
SCN2BO60939 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SCN2BO60939 FAM21FP-204ENST00000608637 956 ntBASIC19.13■□□□□ 0.65
SCN2BO60939 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCN2BO60939 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCN2BO60939 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SCN2BO60939 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCN2BO60939 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCN2BO60939 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCN2BO60939 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCN2BO60939 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.13■□□□□ 0.65
SCN2BO60939 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.13■□□□□ 0.65
SCN2BO60939 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCN2BO60939 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
SCN2BO60939 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCN2BO60939 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCN2BO60939 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCN2BO60939 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCN2BO60939 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.13■□□□□ 0.65
SCN2BO60939 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
SCN2BO60939 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCN2BO60939 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCN2BO60939 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCN2BO60939 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCN2BO60939 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
SCN2BO60939 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.12■□□□□ 0.65
SCN2BO60939 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCN2BO60939 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.12■□□□□ 0.65
SCN2BO60939 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.12■□□□□ 0.65
SCN2BO60939 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SCN2BO60939 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCN2BO60939 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.12■□□□□ 0.65
SCN2BO60939 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms