Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.54■□□□□ 0.88
PRAMEF11O60813 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF11O60813 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.54■□□□□ 0.88
PRAMEF11O60813 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF11O60813 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF11O60813 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF11O60813 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF11O60813 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF11O60813 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PRAMEF11O60813 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.54■□□□□ 0.88
PRAMEF11O60813 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.54■□□□□ 0.88
PRAMEF11O60813 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF11O60813 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.54■□□□□ 0.88
PRAMEF11O60813 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.54■□□□□ 0.88
PRAMEF11O60813 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.54■□□□□ 0.88
PRAMEF11O60813 HLA-B-256ENST00000639848 1089 ntBASIC20.54■□□□□ 0.88
PRAMEF11O60813 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF11O60813 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PRAMEF11O60813 AC092667.1-201ENST00000434301 2586 ntBASIC20.54■□□□□ 0.88
PRAMEF11O60813 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF11O60813 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
PRAMEF11O60813 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.54■□□□□ 0.88
PRAMEF11O60813 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEF11O60813 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEF11O60813 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEF11O60813 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEF11O60813 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.53■□□□□ 0.88
PRAMEF11O60813 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEF11O60813 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEF11O60813 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.53■□□□□ 0.88
PRAMEF11O60813 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEF11O60813 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEF11O60813 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.53■□□□□ 0.88
PRAMEF11O60813 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEF11O60813 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PRAMEF11O60813 LINC01006-201ENST00000333319 2292 ntBASIC20.53■□□□□ 0.88
PRAMEF11O60813 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEF11O60813 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEF11O60813 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEF11O60813 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PRAMEF11O60813 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.53■□□□□ 0.88
PRAMEF11O60813 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRAMEF11O60813 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PRAMEF11O60813 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRAMEF11O60813 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
PRAMEF11O60813 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRAMEF11O60813 SMG8-203ENST00000578922 2178 ntBASIC20.52■□□□□ 0.88
PRAMEF11O60813 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRAMEF11O60813 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PRAMEF11O60813 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.52■□□□□ 0.88
PRAMEF11O60813 AC023632.3-201ENST00000521633 145 ntBASIC20.52■□□□□ 0.88
PRAMEF11O60813 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PRAMEF11O60813 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.52■□□□□ 0.88
PRAMEF11O60813 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.52■□□□□ 0.88
PRAMEF11O60813 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.52■□□□□ 0.88
PRAMEF11O60813 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.52■□□□□ 0.88
PRAMEF11O60813 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRAMEF11O60813 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.52■□□□□ 0.88
PRAMEF11O60813 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.52■□□□□ 0.87
PRAMEF11O60813 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
PRAMEF11O60813 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.52■□□□□ 0.87
PRAMEF11O60813 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
PRAMEF11O60813 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
PRAMEF11O60813 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF11O60813 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF11O60813 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF11O60813 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
PRAMEF11O60813 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF11O60813 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PRAMEF11O60813 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF11O60813 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF11O60813 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.51■□□□□ 0.87
PRAMEF11O60813 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
PRAMEF11O60813 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.51■□□□□ 0.87
PRAMEF11O60813 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.51■□□□□ 0.87
PRAMEF11O60813 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.51■□□□□ 0.87
PRAMEF11O60813 KRT18P6-201ENST00000555540 1265 ntBASIC20.51■□□□□ 0.87
PRAMEF11O60813 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.51■□□□□ 0.87
PRAMEF11O60813 AC060766.5-201ENST00000590539 871 ntBASIC20.51■□□□□ 0.87
PRAMEF11O60813 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.51■□□□□ 0.87
PRAMEF11O60813 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.51■□□□□ 0.87
PRAMEF11O60813 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF11O60813 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF11O60813 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF11O60813 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF11O60813 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF11O60813 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF11O60813 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF11O60813 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.51■□□□□ 0.87
PRAMEF11O60813 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF11O60813 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.51■□□□□ 0.87
PRAMEF11O60813 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF11O60813 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF11O60813 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PRAMEF11O60813 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
PRAMEF11O60813 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PRAMEF11O60813 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.5■□□□□ 0.87
PRAMEF11O60813 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.5■□□□□ 0.87
PRAMEF11O60813 AL512408.1-201ENST00000569378 2000 ntBASIC20.5■□□□□ 0.87
PRAMEF11O60813 AL162377.1-201ENST00000618844 1793 ntBASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms