Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AC111152.3-201ENST00000569699 673 ntBASIC19.84■□□□□ 0.77
GFRA3O60609 AC130371.2-201ENST00000619443 611 ntBASIC19.84■□□□□ 0.77
GFRA3O60609 AC011558.1-201ENST00000623459 338 ntBASIC19.84■□□□□ 0.77
GFRA3O60609 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.84■□□□□ 0.77
GFRA3O60609 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
GFRA3O60609 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.84■□□□□ 0.77
GFRA3O60609 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GFRA3O60609 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GFRA3O60609 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.84■□□□□ 0.77
GFRA3O60609 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.84■□□□□ 0.77
GFRA3O60609 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GFRA3O60609 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
GFRA3O60609 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
GFRA3O60609 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
GFRA3O60609 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.83■□□□□ 0.77
GFRA3O60609 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
GFRA3O60609 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.83■□□□□ 0.77
GFRA3O60609 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
GFRA3O60609 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
GFRA3O60609 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.83■□□□□ 0.77
GFRA3O60609 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
GFRA3O60609 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.83■□□□□ 0.77
GFRA3O60609 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
GFRA3O60609 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.83■□□□□ 0.77
GFRA3O60609 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.83■□□□□ 0.77
GFRA3O60609 AC097488.1-201ENST00000507834 756 ntBASIC19.83■□□□□ 0.77
GFRA3O60609 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.83■□□□□ 0.77
GFRA3O60609 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.83■□□□□ 0.77
GFRA3O60609 PRELID1P1-202ENST00000567272 903 ntBASIC19.83■□□□□ 0.77
GFRA3O60609 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.83■□□□□ 0.77
GFRA3O60609 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.83■□□□□ 0.77
GFRA3O60609 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
GFRA3O60609 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.83■□□□□ 0.76
GFRA3O60609 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GFRA3O60609 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GFRA3O60609 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GFRA3O60609 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GFRA3O60609 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
GFRA3O60609 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
GFRA3O60609 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GFRA3O60609 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GFRA3O60609 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
GFRA3O60609 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.82■□□□□ 0.76
GFRA3O60609 FAAHP1-202ENST00000446499 1238 ntBASIC19.82■□□□□ 0.76
GFRA3O60609 AL359075.1-203ENST00000462729 1002 ntBASIC19.82■□□□□ 0.76
GFRA3O60609 VENTXP5-201ENST00000523979 775 ntBASIC19.82■□□□□ 0.76
GFRA3O60609 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.82■□□□□ 0.76
GFRA3O60609 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.82■□□□□ 0.76
GFRA3O60609 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
GFRA3O60609 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GFRA3O60609 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GFRA3O60609 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
GFRA3O60609 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
GFRA3O60609 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
GFRA3O60609 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GFRA3O60609 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GFRA3O60609 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.81■□□□□ 0.76
GFRA3O60609 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GFRA3O60609 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GFRA3O60609 MESTP1-201ENST00000404287 994 ntBASIC19.81■□□□□ 0.76
GFRA3O60609 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.81■□□□□ 0.76
GFRA3O60609 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.81■□□□□ 0.76
GFRA3O60609 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
GFRA3O60609 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.81■□□□□ 0.76
GFRA3O60609 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GFRA3O60609 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.81■□□□□ 0.76
GFRA3O60609 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
GFRA3O60609 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
GFRA3O60609 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GFRA3O60609 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
GFRA3O60609 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GFRA3O60609 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GFRA3O60609 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.8■□□□□ 0.76
GFRA3O60609 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
GFRA3O60609 AC020928.2-201ENST00000588717 2197 ntBASIC19.8■□□□□ 0.76
GFRA3O60609 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
GFRA3O60609 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GFRA3O60609 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
GFRA3O60609 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
GFRA3O60609 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
GFRA3O60609 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GFRA3O60609 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GFRA3O60609 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.8■□□□□ 0.76
GFRA3O60609 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GFRA3O60609 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GFRA3O60609 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GFRA3O60609 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
GFRA3O60609 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GFRA3O60609 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.8■□□□□ 0.76
GFRA3O60609 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GFRA3O60609 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GFRA3O60609 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GFRA3O60609 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
GFRA3O60609 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
GFRA3O60609 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.79■□□□□ 0.76
GFRA3O60609 ATP5G2P1-201ENST00000433580 426 ntBASIC19.79■□□□□ 0.76
GFRA3O60609 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.79■□□□□ 0.76
GFRA3O60609 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.79■□□□□ 0.76
GFRA3O60609 AL356652.1-201ENST00000615962 565 ntBASIC19.79■□□□□ 0.76
GFRA3O60609 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms