Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 KRT18P5-201ENST00000436075 1291 ntBASIC18.38■□□□□ 0.53
RNF13O43567 CDV3P1-201ENST00000471403 739 ntBASIC18.38■□□□□ 0.53
RNF13O43567 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RNF13O43567 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF13O43567 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF13O43567 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF13O43567 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF13O43567 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF13O43567 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF13O43567 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF13O43567 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF13O43567 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF13O43567 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF13O43567 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF13O43567 AL162377.1-201ENST00000618844 1793 ntBASIC18.37■□□□□ 0.53
RNF13O43567 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF13O43567 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF13O43567 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RNF13O43567 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF13O43567 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
RNF13O43567 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF13O43567 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF13O43567 AC112907.3-201ENST00000577781 2400 ntBASIC18.37■□□□□ 0.53
RNF13O43567 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF13O43567 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
RNF13O43567 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF13O43567 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.37■□□□□ 0.53
RNF13O43567 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF13O43567 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF13O43567 AC026271.2-201ENST00000428091 497 ntBASIC18.37■□□□□ 0.53
RNF13O43567 KRT18P11-201ENST00000435214 1283 ntBASIC18.37■□□□□ 0.53
RNF13O43567 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RNF13O43567 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
RNF13O43567 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF13O43567 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF13O43567 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF13O43567 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF13O43567 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF13O43567 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
RNF13O43567 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF13O43567 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF13O43567 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
RNF13O43567 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.37■□□□□ 0.53
RNF13O43567 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
RNF13O43567 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF13O43567 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF13O43567 AL512408.1-201ENST00000569378 2000 ntBASIC18.37■□□□□ 0.53
RNF13O43567 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF13O43567 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF13O43567 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF13O43567 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.37■□□□□ 0.53
RNF13O43567 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF13O43567 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF13O43567 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF13O43567 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF13O43567 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
RNF13O43567 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF13O43567 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF13O43567 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RNF13O43567 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.36■□□□□ 0.53
RNF13O43567 AC016769.1-201ENST00000409132 1010 ntBASIC18.36■□□□□ 0.53
RNF13O43567 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF13O43567 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF13O43567 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF13O43567 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF13O43567 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF13O43567 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.36■□□□□ 0.53
RNF13O43567 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
RNF13O43567 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF13O43567 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF13O43567 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RNF13O43567 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF13O43567 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF13O43567 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF13O43567 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF13O43567 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF13O43567 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF13O43567 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF13O43567 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RNF13O43567 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF13O43567 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.35■□□□□ 0.53
RNF13O43567 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF13O43567 TERF1P5-201ENST00000477545 1207 ntBASIC18.35■□□□□ 0.53
RNF13O43567 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.35■□□□□ 0.53
RNF13O43567 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.35■□□□□ 0.53
RNF13O43567 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF13O43567 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RNF13O43567 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
RNF13O43567 AC010536.3-201ENST00000620306 533 ntBASIC18.35■□□□□ 0.53
RNF13O43567 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF13O43567 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF13O43567 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF13O43567 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF13O43567 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF13O43567 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF13O43567 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF13O43567 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF13O43567 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF13O43567 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF13O43567 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms