Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.55■□□□□ 0.4
XRCC2O43543 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
XRCC2O43543 CNN2P6-201ENST00000439038 900 ntBASIC17.55■□□□□ 0.4
XRCC2O43543 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.55■□□□□ 0.4
XRCC2O43543 RARRES2P4-201ENST00000514074 484 ntBASIC17.55■□□□□ 0.4
XRCC2O43543 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.55■□□□□ 0.4
XRCC2O43543 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.55■□□□□ 0.4
XRCC2O43543 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.55■□□□□ 0.4
XRCC2O43543 AC016405.3-201ENST00000607710 860 ntBASIC17.55■□□□□ 0.4
XRCC2O43543 AC100791.3-201ENST00000617619 330 ntBASIC17.55■□□□□ 0.4
XRCC2O43543 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.55■□□□□ 0.4
XRCC2O43543 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
XRCC2O43543 RNF165-205ENST00000588679 2904 ntBASIC17.55■□□□□ 0.4
XRCC2O43543 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
XRCC2O43543 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
XRCC2O43543 AL162377.1-201ENST00000618844 1793 ntBASIC17.55■□□□□ 0.4
XRCC2O43543 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
XRCC2O43543 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
XRCC2O43543 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
XRCC2O43543 AC068338.2-201ENST00000563278 1430 ntBASIC17.55■□□□□ 0.4
XRCC2O43543 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
XRCC2O43543 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
XRCC2O43543 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
XRCC2O43543 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.55■□□□□ 0.4
XRCC2O43543 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
XRCC2O43543 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
XRCC2O43543 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
XRCC2O43543 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
XRCC2O43543 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
XRCC2O43543 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
XRCC2O43543 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
XRCC2O43543 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
XRCC2O43543 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
XRCC2O43543 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
XRCC2O43543 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.54■□□□□ 0.4
XRCC2O43543 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
XRCC2O43543 AL512408.1-201ENST00000569378 2000 ntBASIC17.54■□□□□ 0.4
XRCC2O43543 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
XRCC2O43543 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
XRCC2O43543 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
XRCC2O43543 AC069236.1-201ENST00000604339 616 ntBASIC17.54■□□□□ 0.4
XRCC2O43543 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.54■□□□□ 0.4
XRCC2O43543 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.54■□□□□ 0.4
XRCC2O43543 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
XRCC2O43543 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.54■□□□□ 0.4
XRCC2O43543 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
XRCC2O43543 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
XRCC2O43543 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
XRCC2O43543 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
XRCC2O43543 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
XRCC2O43543 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
XRCC2O43543 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
XRCC2O43543 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
XRCC2O43543 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
XRCC2O43543 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
XRCC2O43543 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
XRCC2O43543 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
XRCC2O43543 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.53■□□□□ 0.4
XRCC2O43543 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
XRCC2O43543 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
XRCC2O43543 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.53■□□□□ 0.4
XRCC2O43543 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
XRCC2O43543 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
XRCC2O43543 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.53■□□□□ 0.4
XRCC2O43543 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
XRCC2O43543 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
XRCC2O43543 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
XRCC2O43543 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
XRCC2O43543 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
XRCC2O43543 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
XRCC2O43543 MCRIP2P1-201ENST00000394346 511 ntBASIC17.53■□□□□ 0.4
XRCC2O43543 AC007322.1-201ENST00000426983 750 ntBASIC17.53■□□□□ 0.4
XRCC2O43543 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
XRCC2O43543 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.53■□□□□ 0.4
XRCC2O43543 AC022517.1-201ENST00000592429 346 ntBASIC17.53■□□□□ 0.4
XRCC2O43543 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.53■□□□□ 0.4
XRCC2O43543 AC008694.1-202ENST00000636953 945 ntBASIC17.53■□□□□ 0.4
XRCC2O43543 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
XRCC2O43543 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
XRCC2O43543 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
XRCC2O43543 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.53■□□□□ 0.4
XRCC2O43543 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
XRCC2O43543 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
XRCC2O43543 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
XRCC2O43543 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
XRCC2O43543 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
XRCC2O43543 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.52■□□□□ 0.4
XRCC2O43543 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
XRCC2O43543 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
XRCC2O43543 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
XRCC2O43543 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
XRCC2O43543 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
XRCC2O43543 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.52■□□□□ 0.4
XRCC2O43543 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
XRCC2O43543 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.52■□□□□ 0.4
XRCC2O43543 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
XRCC2O43543 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.52■□□□□ 0.39
XRCC2O43543 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
XRCC2O43543 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
XRCC2O43543 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms