Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TNRC18O15417 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
TNRC18O15417 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TNRC18O15417 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TNRC18O15417 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC22.3■■□□□ 1.16
TNRC18O15417 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
TNRC18O15417 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
TNRC18O15417 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TNRC18O15417 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
TNRC18O15417 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TNRC18O15417 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TNRC18O15417 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TNRC18O15417 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
TNRC18O15417 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC22.3■■□□□ 1.16
TNRC18O15417 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC22.3■■□□□ 1.16
TNRC18O15417 ABBA01031674.1-201ENST00000635145 728 ntBASIC22.3■■□□□ 1.16
TNRC18O15417 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TNRC18O15417 AC004812.2-201ENST00000611079 2094 ntBASIC22.3■■□□□ 1.16
TNRC18O15417 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TNRC18O15417 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC22.29■■□□□ 1.16
TNRC18O15417 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TNRC18O15417 B3GAT3P1-201ENST00000471720 806 ntBASIC22.29■■□□□ 1.16
TNRC18O15417 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC22.29■■□□□ 1.16
TNRC18O15417 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TNRC18O15417 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
TNRC18O15417 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
TNRC18O15417 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
TNRC18O15417 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TNRC18O15417 AC004951.3-201ENST00000418645 1148 ntBASIC22.29■■□□□ 1.16
TNRC18O15417 PMS2P1-201ENST00000431037 1228 ntBASIC22.29■■□□□ 1.16
TNRC18O15417 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
TNRC18O15417 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC22.29■■□□□ 1.16
TNRC18O15417 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.28■■□□□ 1.16
TNRC18O15417 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TNRC18O15417 PPP1R14BP5-201ENST00000440334 435 ntBASIC22.28■■□□□ 1.16
TNRC18O15417 SLC25A6P4-201ENST00000586535 553 ntBASIC22.28■■□□□ 1.16
TNRC18O15417 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
TNRC18O15417 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
TNRC18O15417 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
TNRC18O15417 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
TNRC18O15417 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC22.28■■□□□ 1.16
TNRC18O15417 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TNRC18O15417 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC22.28■■□□□ 1.16
TNRC18O15417 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC22.28■■□□□ 1.16
TNRC18O15417 AC120114.3-201ENST00000611923 658 ntBASIC22.28■■□□□ 1.16
TNRC18O15417 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC22.28■■□□□ 1.16
TNRC18O15417 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.28■■□□□ 1.16
TNRC18O15417 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TNRC18O15417 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TNRC18O15417 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TNRC18O15417 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC22.27■■□□□ 1.16
TNRC18O15417 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC22.27■■□□□ 1.16
TNRC18O15417 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC22.27■■□□□ 1.16
TNRC18O15417 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC22.27■■□□□ 1.16
TNRC18O15417 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.27■■□□□ 1.16
TNRC18O15417 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC22.27■■□□□ 1.16
TNRC18O15417 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
TNRC18O15417 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TNRC18O15417 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TNRC18O15417 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC22.27■■□□□ 1.16
TNRC18O15417 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
TNRC18O15417 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TNRC18O15417 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
TNRC18O15417 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TNRC18O15417 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TNRC18O15417 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TNRC18O15417 ANKRD20A18P-201ENST00000359341 492 ntBASIC22.26■■□□□ 1.15
TNRC18O15417 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TNRC18O15417 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
TNRC18O15417 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC22.26■■□□□ 1.15
TNRC18O15417 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TNRC18O15417 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TNRC18O15417 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
TNRC18O15417 AC004870.1-201ENST00000315132 882 ntBASIC22.26■■□□□ 1.15
TNRC18O15417 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.26■■□□□ 1.15
TNRC18O15417 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC22.26■■□□□ 1.15
TNRC18O15417 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC22.26■■□□□ 1.15
TNRC18O15417 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
TNRC18O15417 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
TNRC18O15417 AC097488.1-201ENST00000507834 756 ntBASIC22.26■■□□□ 1.15
TNRC18O15417 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TNRC18O15417 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC22.26■■□□□ 1.15
TNRC18O15417 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC22.26■■□□□ 1.15
TNRC18O15417 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
TNRC18O15417 AL732292.2-201ENST00000609649 430 ntBASIC22.26■■□□□ 1.15
TNRC18O15417 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TNRC18O15417 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.25■■□□□ 1.15
TNRC18O15417 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TNRC18O15417 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
TNRC18O15417 FSCN1P1-201ENST00000568912 1481 ntBASIC22.25■■□□□ 1.15
TNRC18O15417 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TNRC18O15417 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TNRC18O15417 AC079781.3-201ENST00000449110 356 ntBASIC22.25■■□□□ 1.15
TNRC18O15417 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
TNRC18O15417 AL139125.2-201ENST00000623134 1869 ntBASIC22.25■■□□□ 1.15
TNRC18O15417 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TNRC18O15417 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
TNRC18O15417 AC092053.2-201ENST00000640557 1818 ntBASIC22.25■■□□□ 1.15
TNRC18O15417 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TNRC18O15417 TEX30-205ENST00000376029 959 ntTSL 2 BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms