Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.32■□□□□ 0.84
MID1O15344 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MID1O15344 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MID1O15344 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MID1O15344 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.32■□□□□ 0.84
MID1O15344 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MID1O15344 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MID1O15344 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
MID1O15344 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MID1O15344 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.31■□□□□ 0.84
MID1O15344 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.31■□□□□ 0.84
MID1O15344 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
MID1O15344 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MID1O15344 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
MID1O15344 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
MID1O15344 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MID1O15344 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
MID1O15344 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.31■□□□□ 0.84
MID1O15344 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MID1O15344 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.31■□□□□ 0.84
MID1O15344 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MID1O15344 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MID1O15344 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.31■□□□□ 0.84
MID1O15344 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.31■□□□□ 0.84
MID1O15344 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MID1O15344 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MID1O15344 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
MID1O15344 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
MID1O15344 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MID1O15344 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MID1O15344 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MID1O15344 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MID1O15344 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MID1O15344 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
MID1O15344 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
MID1O15344 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MID1O15344 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MID1O15344 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.3■□□□□ 0.84
MID1O15344 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
MID1O15344 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
MID1O15344 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.3■□□□□ 0.84
MID1O15344 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.3■□□□□ 0.84
MID1O15344 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MID1O15344 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MID1O15344 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
MID1O15344 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MID1O15344 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
MID1O15344 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MID1O15344 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MID1O15344 PKD1P6-201ENST00000343738 4769 ntBASIC20.29■□□□□ 0.84
MID1O15344 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MID1O15344 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MID1O15344 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
MID1O15344 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MID1O15344 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.29■□□□□ 0.84
MID1O15344 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
MID1O15344 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
MID1O15344 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.29■□□□□ 0.84
MID1O15344 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.29■□□□□ 0.84
MID1O15344 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
MID1O15344 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MID1O15344 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.29■□□□□ 0.84
MID1O15344 LINC00565-201ENST00000562710 2331 ntBASIC20.28■□□□□ 0.84
MID1O15344 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
MID1O15344 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
MID1O15344 PLK5-205ENST00000642079 1969 ntBASIC20.28■□□□□ 0.84
MID1O15344 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MID1O15344 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
MID1O15344 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
MID1O15344 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
MID1O15344 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.28■□□□□ 0.84
MID1O15344 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MID1O15344 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MID1O15344 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MID1O15344 MIR718-201ENST00000390190 70 ntBASIC20.28■□□□□ 0.84
MID1O15344 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.28■□□□□ 0.84
MID1O15344 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MID1O15344 AC239809.2-201ENST00000415381 517 ntBASIC20.28■□□□□ 0.84
MID1O15344 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.28■□□□□ 0.84
MID1O15344 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.28■□□□□ 0.84
MID1O15344 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.28■□□□□ 0.84
MID1O15344 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.28■□□□□ 0.84
MID1O15344 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.28■□□□□ 0.84
MID1O15344 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.28■□□□□ 0.84
MID1O15344 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.28■□□□□ 0.84
MID1O15344 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.28■□□□□ 0.84
MID1O15344 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
MID1O15344 Z99916.2-201ENST00000604037 246 ntBASIC20.28■□□□□ 0.84
MID1O15344 AC124016.1-201ENST00000609552 612 ntBASIC20.28■□□□□ 0.84
MID1O15344 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MID1O15344 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MID1O15344 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.28■□□□□ 0.84
MID1O15344 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
MID1O15344 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MID1O15344 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MID1O15344 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.27■□□□□ 0.84
MID1O15344 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
MID1O15344 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MID1O15344 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MID1O15344 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms