Protein–RNA interactions for Protein: O15297

PPM1D, Protein phosphatase 1D, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1DO15297 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPM1DO15297 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPM1DO15297 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PPM1DO15297 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.67■□□□□ 0.74
PPM1DO15297 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PPM1DO15297 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PPM1DO15297 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PPM1DO15297 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PPM1DO15297 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PPM1DO15297 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.67■□□□□ 0.74
PPM1DO15297 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PPM1DO15297 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PPM1DO15297 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.67■□□□□ 0.74
PPM1DO15297 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PPM1DO15297 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PPM1DO15297 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PPM1DO15297 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
PPM1DO15297 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
PPM1DO15297 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.67■□□□□ 0.74
PPM1DO15297 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PPM1DO15297 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.67■□□□□ 0.74
PPM1DO15297 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PPM1DO15297 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PPM1DO15297 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PPM1DO15297 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PPM1DO15297 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
PPM1DO15297 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PPM1DO15297 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PPM1DO15297 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.67■□□□□ 0.74
PPM1DO15297 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.67■□□□□ 0.74
PPM1DO15297 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
PPM1DO15297 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PPM1DO15297 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PPM1DO15297 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.66■□□□□ 0.74
PPM1DO15297 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PPM1DO15297 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PPM1DO15297 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PPM1DO15297 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PPM1DO15297 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PPM1DO15297 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PPM1DO15297 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PPM1DO15297 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PPM1DO15297 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
PPM1DO15297 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.66■□□□□ 0.74
PPM1DO15297 AC120498.8-201ENST00000614275 531 ntBASIC19.66■□□□□ 0.74
PPM1DO15297 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PPM1DO15297 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
PPM1DO15297 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PPM1DO15297 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PPM1DO15297 KRT8P36-201ENST00000489121 1440 ntBASIC19.66■□□□□ 0.74
PPM1DO15297 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PPM1DO15297 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PPM1DO15297 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PPM1DO15297 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PPM1DO15297 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PPM1DO15297 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PPM1DO15297 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PPM1DO15297 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PPM1DO15297 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PPM1DO15297 UBE2SP1-201ENST00000450587 669 ntBASIC19.65■□□□□ 0.74
PPM1DO15297 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.65■□□□□ 0.74
PPM1DO15297 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.65■□□□□ 0.74
PPM1DO15297 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.65■□□□□ 0.74
PPM1DO15297 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.65■□□□□ 0.74
PPM1DO15297 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
PPM1DO15297 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.65■□□□□ 0.74
PPM1DO15297 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PPM1DO15297 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.65■□□□□ 0.74
PPM1DO15297 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PPM1DO15297 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PPM1DO15297 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.65■□□□□ 0.74
PPM1DO15297 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PPM1DO15297 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
PPM1DO15297 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PPM1DO15297 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.65■□□□□ 0.74
PPM1DO15297 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.65■□□□□ 0.74
PPM1DO15297 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.64■□□□□ 0.74
PPM1DO15297 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
PPM1DO15297 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
PPM1DO15297 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PPM1DO15297 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.64■□□□□ 0.73
PPM1DO15297 RPS2P4-201ENST00000476944 856 ntBASIC19.64■□□□□ 0.73
PPM1DO15297 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.64■□□□□ 0.73
PPM1DO15297 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.64■□□□□ 0.73
PPM1DO15297 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.64■□□□□ 0.73
PPM1DO15297 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PPM1DO15297 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.64■□□□□ 0.73
PPM1DO15297 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.64■□□□□ 0.73
PPM1DO15297 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.64■□□□□ 0.73
PPM1DO15297 FAM197Y4-202ENST00000622692 608 ntBASIC19.64■□□□□ 0.73
PPM1DO15297 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PPM1DO15297 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
PPM1DO15297 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PPM1DO15297 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.64■□□□□ 0.73
PPM1DO15297 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PPM1DO15297 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PPM1DO15297 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PPM1DO15297 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PPM1DO15297 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.64■□□□□ 0.73
PPM1DO15297 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms