Protein–RNA interactions for Protein: O00458

IFRD1, Interferon-related developmental regulator 1, humanhuman

Predicted RBP Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1O00458 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
IFRD1O00458 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
IFRD1O00458 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
IFRD1O00458 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
IFRD1O00458 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
IFRD1O00458 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
IFRD1O00458 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
IFRD1O00458 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.96■□□□□ 0.79
IFRD1O00458 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.96■□□□□ 0.79
IFRD1O00458 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.96■□□□□ 0.79
IFRD1O00458 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
IFRD1O00458 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
IFRD1O00458 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.96■□□□□ 0.79
IFRD1O00458 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.96■□□□□ 0.79
IFRD1O00458 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
IFRD1O00458 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
IFRD1O00458 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
IFRD1O00458 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
IFRD1O00458 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
IFRD1O00458 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.95■□□□□ 0.79
IFRD1O00458 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.95■□□□□ 0.78
IFRD1O00458 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
IFRD1O00458 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
IFRD1O00458 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
IFRD1O00458 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
IFRD1O00458 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
IFRD1O00458 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
IFRD1O00458 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
IFRD1O00458 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
IFRD1O00458 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
IFRD1O00458 AIRN-201ENST00000601203 4374 ntBASIC19.95■□□□□ 0.78
IFRD1O00458 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
IFRD1O00458 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
IFRD1O00458 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
IFRD1O00458 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
IFRD1O00458 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.95■□□□□ 0.78
IFRD1O00458 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.95■□□□□ 0.78
IFRD1O00458 AC092118.2-201ENST00000613495 667 ntBASIC19.95■□□□□ 0.78
IFRD1O00458 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.95■□□□□ 0.78
IFRD1O00458 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.95■□□□□ 0.78
IFRD1O00458 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
IFRD1O00458 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
IFRD1O00458 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
IFRD1O00458 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.95■□□□□ 0.78
IFRD1O00458 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
IFRD1O00458 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.95■□□□□ 0.78
IFRD1O00458 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
IFRD1O00458 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
IFRD1O00458 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
IFRD1O00458 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
IFRD1O00458 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
IFRD1O00458 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.94■□□□□ 0.78
IFRD1O00458 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.94■□□□□ 0.78
IFRD1O00458 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
IFRD1O00458 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
IFRD1O00458 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.94■□□□□ 0.78
IFRD1O00458 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.94■□□□□ 0.78
IFRD1O00458 AL138781.1-201ENST00000566567 1274 ntBASIC19.94■□□□□ 0.78
IFRD1O00458 AC142086.2-201ENST00000569753 217 ntBASIC19.94■□□□□ 0.78
IFRD1O00458 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.94■□□□□ 0.78
IFRD1O00458 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
IFRD1O00458 AL356652.1-201ENST00000615962 565 ntBASIC19.94■□□□□ 0.78
IFRD1O00458 AC133041.1-202ENST00000642053 222 ntBASIC19.94■□□□□ 0.78
IFRD1O00458 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
IFRD1O00458 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
IFRD1O00458 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.94■□□□□ 0.78
IFRD1O00458 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
IFRD1O00458 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
IFRD1O00458 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
IFRD1O00458 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
IFRD1O00458 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
IFRD1O00458 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.93■□□□□ 0.78
IFRD1O00458 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
IFRD1O00458 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
IFRD1O00458 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.93■□□□□ 0.78
IFRD1O00458 KRT17P1-201ENST00000399211 1546 ntBASIC19.93■□□□□ 0.78
IFRD1O00458 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
IFRD1O00458 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
IFRD1O00458 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
IFRD1O00458 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
IFRD1O00458 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.93■□□□□ 0.78
IFRD1O00458 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
IFRD1O00458 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
IFRD1O00458 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.93■□□□□ 0.78
IFRD1O00458 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.93■□□□□ 0.78
IFRD1O00458 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.93■□□□□ 0.78
IFRD1O00458 AC105020.6-201ENST00000621523 1217 ntBASIC19.93■□□□□ 0.78
IFRD1O00458 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.93■□□□□ 0.78
IFRD1O00458 MIR2861-201ENST00000636310 90 ntBASIC19.93■□□□□ 0.78
IFRD1O00458 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.93■□□□□ 0.78
IFRD1O00458 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
IFRD1O00458 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
IFRD1O00458 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
IFRD1O00458 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
IFRD1O00458 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
IFRD1O00458 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
IFRD1O00458 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.93■□□□□ 0.78
IFRD1O00458 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
IFRD1O00458 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
IFRD1O00458 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms