Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TAF4O00268 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TAF4O00268 AP001412.1-201ENST00000608405 714 ntBASIC19.75■□□□□ 0.75
TAF4O00268 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TAF4O00268 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.75■□□□□ 0.75
TAF4O00268 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
TAF4O00268 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TAF4O00268 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.75■□□□□ 0.75
TAF4O00268 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TAF4O00268 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TAF4O00268 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TAF4O00268 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TAF4O00268 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
TAF4O00268 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TAF4O00268 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TAF4O00268 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TAF4O00268 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.74■□□□□ 0.75
TAF4O00268 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TAF4O00268 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TAF4O00268 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.74■□□□□ 0.75
TAF4O00268 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.74■□□□□ 0.75
TAF4O00268 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.74■□□□□ 0.75
TAF4O00268 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.74■□□□□ 0.75
TAF4O00268 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.74■□□□□ 0.75
TAF4O00268 AL353708.3-201ENST00000610272 989 ntBASIC19.74■□□□□ 0.75
TAF4O00268 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.74■□□□□ 0.75
TAF4O00268 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.74■□□□□ 0.75
TAF4O00268 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
TAF4O00268 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TAF4O00268 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TAF4O00268 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TAF4O00268 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.73■□□□□ 0.75
TAF4O00268 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
TAF4O00268 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TAF4O00268 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.73■□□□□ 0.75
TAF4O00268 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TAF4O00268 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TAF4O00268 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
TAF4O00268 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TAF4O00268 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
TAF4O00268 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TAF4O00268 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TAF4O00268 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TAF4O00268 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TAF4O00268 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.73■□□□□ 0.75
TAF4O00268 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.73■□□□□ 0.75
TAF4O00268 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TAF4O00268 KRT16P2-201ENST00000414673 1423 ntBASIC19.73■□□□□ 0.75
TAF4O00268 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.73■□□□□ 0.75
TAF4O00268 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TAF4O00268 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TAF4O00268 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TAF4O00268 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.73■□□□□ 0.75
TAF4O00268 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TAF4O00268 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TAF4O00268 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TAF4O00268 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.72■□□□□ 0.75
TAF4O00268 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
TAF4O00268 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TAF4O00268 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TAF4O00268 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TAF4O00268 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
TAF4O00268 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TAF4O00268 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TAF4O00268 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TAF4O00268 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
TAF4O00268 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TAF4O00268 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TAF4O00268 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.72■□□□□ 0.75
TAF4O00268 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TAF4O00268 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.72■□□□□ 0.75
TAF4O00268 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TAF4O00268 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.72■□□□□ 0.75
TAF4O00268 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.72■□□□□ 0.75
TAF4O00268 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
TAF4O00268 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TAF4O00268 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TAF4O00268 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TAF4O00268 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TAF4O00268 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TAF4O00268 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
TAF4O00268 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.71■□□□□ 0.75
TAF4O00268 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.71■□□□□ 0.75
TAF4O00268 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TAF4O00268 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.71■□□□□ 0.75
TAF4O00268 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TAF4O00268 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TAF4O00268 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.71■□□□□ 0.75
TAF4O00268 AC124016.1-201ENST00000609552 612 ntBASIC19.71■□□□□ 0.75
TAF4O00268 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TAF4O00268 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TAF4O00268 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TAF4O00268 AP006587.3-201ENST00000525742 1516 ntBASIC19.71■□□□□ 0.75
TAF4O00268 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TAF4O00268 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TAF4O00268 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TAF4O00268 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TAF4O00268 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TAF4O00268 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TAF4O00268 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms