Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 YBX1P2-201ENST00000489612 999 ntBASIC18.34■□□□□ 0.53
COL6A6A6NMZ7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL6A6A6NMZ7 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL6A6A6NMZ7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL6A6A6NMZ7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
COL6A6A6NMZ7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
COL6A6A6NMZ7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.33■□□□□ 0.53
COL6A6A6NMZ7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL6A6A6NMZ7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL6A6A6NMZ7 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.33■□□□□ 0.53
COL6A6A6NMZ7 SLC25A1P4-201ENST00000567977 778 ntBASIC18.33■□□□□ 0.53
COL6A6A6NMZ7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL6A6A6NMZ7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL6A6A6NMZ7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL6A6A6NMZ7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.33■□□□□ 0.52
COL6A6A6NMZ7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL6A6A6NMZ7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.33■□□□□ 0.52
COL6A6A6NMZ7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.33■□□□□ 0.52
COL6A6A6NMZ7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL6A6A6NMZ7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.33■□□□□ 0.52
COL6A6A6NMZ7 AC010203.1-204ENST00000548782 407 ntBASIC18.33■□□□□ 0.52
COL6A6A6NMZ7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.33■□□□□ 0.52
COL6A6A6NMZ7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
COL6A6A6NMZ7 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.33■□□□□ 0.52
COL6A6A6NMZ7 AC004263.2-201ENST00000617183 678 ntBASIC18.33■□□□□ 0.52
COL6A6A6NMZ7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.33■□□□□ 0.52
COL6A6A6NMZ7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.33■□□□□ 0.52
COL6A6A6NMZ7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.33■□□□□ 0.52
COL6A6A6NMZ7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL6A6A6NMZ7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL6A6A6NMZ7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.32■□□□□ 0.52
COL6A6A6NMZ7 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL6A6A6NMZ7 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
COL6A6A6NMZ7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL6A6A6NMZ7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL6A6A6NMZ7 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.32■□□□□ 0.52
COL6A6A6NMZ7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
COL6A6A6NMZ7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL6A6A6NMZ7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
COL6A6A6NMZ7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
COL6A6A6NMZ7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.32■□□□□ 0.52
COL6A6A6NMZ7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
COL6A6A6NMZ7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.32■□□□□ 0.52
COL6A6A6NMZ7 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL6A6A6NMZ7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL6A6A6NMZ7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL6A6A6NMZ7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL6A6A6NMZ7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL6A6A6NMZ7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL6A6A6NMZ7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL6A6A6NMZ7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL6A6A6NMZ7 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL6A6A6NMZ7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
COL6A6A6NMZ7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL6A6A6NMZ7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL6A6A6NMZ7 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.32■□□□□ 0.52
COL6A6A6NMZ7 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
COL6A6A6NMZ7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.31■□□□□ 0.52
COL6A6A6NMZ7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL6A6A6NMZ7 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL6A6A6NMZ7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
COL6A6A6NMZ7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL6A6A6NMZ7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL6A6A6NMZ7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL6A6A6NMZ7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.31■□□□□ 0.52
COL6A6A6NMZ7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
COL6A6A6NMZ7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.31■□□□□ 0.52
COL6A6A6NMZ7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.31■□□□□ 0.52
COL6A6A6NMZ7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL6A6A6NMZ7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL6A6A6NMZ7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL6A6A6NMZ7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL6A6A6NMZ7 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL6A6A6NMZ7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL6A6A6NMZ7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL6A6A6NMZ7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL6A6A6NMZ7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.3■□□□□ 0.52
COL6A6A6NMZ7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.3■□□□□ 0.52
COL6A6A6NMZ7 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.3■□□□□ 0.52
COL6A6A6NMZ7 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.3■□□□□ 0.52
COL6A6A6NMZ7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL6A6A6NMZ7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL6A6A6NMZ7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL6A6A6NMZ7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL6A6A6NMZ7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.3■□□□□ 0.52
COL6A6A6NMZ7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.3■□□□□ 0.52
COL6A6A6NMZ7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.3■□□□□ 0.52
COL6A6A6NMZ7 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL6A6A6NMZ7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.3■□□□□ 0.52
COL6A6A6NMZ7 AP005242.2-201ENST00000580065 1175 ntBASIC18.3■□□□□ 0.52
COL6A6A6NMZ7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.3■□□□□ 0.52
COL6A6A6NMZ7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.3■□□□□ 0.52
COL6A6A6NMZ7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL6A6A6NMZ7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL6A6A6NMZ7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL6A6A6NMZ7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL6A6A6NMZ7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.3■□□□□ 0.52
COL6A6A6NMZ7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL6A6A6NMZ7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL6A6A6NMZ7 TSPY14P-201ENST00000303979 915 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms