Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC162PA2VCL2 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC162PA2VCL2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC162PA2VCL2 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC162PA2VCL2 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC162PA2VCL2 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC162PA2VCL2 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC162PA2VCL2 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC162PA2VCL2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC162PA2VCL2 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC162PA2VCL2 AL355472.2-201ENST00000422958 438 ntBASIC20.24■□□□□ 0.83
CCDC162PA2VCL2 AC093787.1-201ENST00000450396 207 ntBASIC20.24■□□□□ 0.83
CCDC162PA2VCL2 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CCDC162PA2VCL2 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.24■□□□□ 0.83
CCDC162PA2VCL2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC162PA2VCL2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CCDC162PA2VCL2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC162PA2VCL2 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC162PA2VCL2 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC162PA2VCL2 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC162PA2VCL2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC162PA2VCL2 AL391422.3-201ENST00000603791 2761 ntBASIC20.23■□□□□ 0.83
CCDC162PA2VCL2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC162PA2VCL2 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
CCDC162PA2VCL2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC162PA2VCL2 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC162PA2VCL2 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC162PA2VCL2 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC162PA2VCL2 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC162PA2VCL2 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC162PA2VCL2 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CCDC162PA2VCL2 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CCDC162PA2VCL2 AC026185.1-201ENST00000445748 174 ntBASIC20.23■□□□□ 0.83
CCDC162PA2VCL2 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.23■□□□□ 0.83
CCDC162PA2VCL2 AL050303.2-201ENST00000619798 666 ntBASIC20.23■□□□□ 0.83
CCDC162PA2VCL2 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC162PA2VCL2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC162PA2VCL2 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC162PA2VCL2 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CCDC162PA2VCL2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CCDC162PA2VCL2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CCDC162PA2VCL2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC162PA2VCL2 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC162PA2VCL2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC162PA2VCL2 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC162PA2VCL2 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC162PA2VCL2 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC162PA2VCL2 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
CCDC162PA2VCL2 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
CCDC162PA2VCL2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC162PA2VCL2 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC162PA2VCL2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC162PA2VCL2 AC010980.2-201ENST00000587099 1412 ntBASIC20.22■□□□□ 0.83
CCDC162PA2VCL2 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC162PA2VCL2 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC162PA2VCL2 KRT18P68-201ENST00000392293 1000 ntBASIC20.22■□□□□ 0.83
CCDC162PA2VCL2 CYP2T3P-201ENST00000601990 817 ntBASIC20.22■□□□□ 0.83
CCDC162PA2VCL2 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC162PA2VCL2 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC162PA2VCL2 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC162PA2VCL2 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC162PA2VCL2 DPP3P2-201ENST00000416030 1696 ntBASIC20.22■□□□□ 0.83
CCDC162PA2VCL2 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC162PA2VCL2 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CCDC162PA2VCL2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CCDC162PA2VCL2 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC162PA2VCL2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC162PA2VCL2 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CCDC162PA2VCL2 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC162PA2VCL2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
CCDC162PA2VCL2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC162PA2VCL2 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC162PA2VCL2 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC162PA2VCL2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC162PA2VCL2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC162PA2VCL2 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC162PA2VCL2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC162PA2VCL2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC162PA2VCL2 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC162PA2VCL2 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CCDC162PA2VCL2 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC162PA2VCL2 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC162PA2VCL2 AC099778.1-201ENST00000568593 1911 ntBASIC20.2■□□□□ 0.82
CCDC162PA2VCL2 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC162PA2VCL2 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.2■□□□□ 0.82
CCDC162PA2VCL2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC162PA2VCL2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC162PA2VCL2 MIR663A-201ENST00000385250 93 ntBASIC20.2■□□□□ 0.82
CCDC162PA2VCL2 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC162PA2VCL2 CROCCP5-201ENST00000436658 830 ntBASIC20.2■□□□□ 0.82
CCDC162PA2VCL2 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
CCDC162PA2VCL2 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC162PA2VCL2 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC162PA2VCL2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC162PA2VCL2 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CCDC162PA2VCL2 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC162PA2VCL2 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC162PA2VCL2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
CCDC162PA2VCL2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CCDC162PA2VCL2 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms