Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.79■■□□□ 1.08
CCDC66A2RUB6 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC66A2RUB6 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC66A2RUB6 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC66A2RUB6 AC019069.1-201ENST00000610008 1333 ntBASIC21.79■■□□□ 1.08
CCDC66A2RUB6 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC66A2RUB6 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC66A2RUB6 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC66A2RUB6 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
CCDC66A2RUB6 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC66A2RUB6 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC66A2RUB6 LTB4R2-202ENST00000528054 3092 ntBASIC21.78■■□□□ 1.08
CCDC66A2RUB6 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.78■■□□□ 1.08
CCDC66A2RUB6 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.78■■□□□ 1.08
CCDC66A2RUB6 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC66A2RUB6 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC66A2RUB6 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC66A2RUB6 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC66A2RUB6 AL139246.5-201ENST00000606645 996 ntBASIC21.78■■□□□ 1.08
CCDC66A2RUB6 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CCDC66A2RUB6 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CCDC66A2RUB6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC66A2RUB6 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC66A2RUB6 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC66A2RUB6 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC66A2RUB6 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CCDC66A2RUB6 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CCDC66A2RUB6 AC007225.1-201ENST00000566331 1836 ntBASIC21.78■■□□□ 1.08
CCDC66A2RUB6 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC66A2RUB6 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC66A2RUB6 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC66A2RUB6 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC66A2RUB6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC66A2RUB6 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC66A2RUB6 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CCDC66A2RUB6 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CCDC66A2RUB6 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC66A2RUB6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC66A2RUB6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC66A2RUB6 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC66A2RUB6 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC66A2RUB6 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC66A2RUB6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC66A2RUB6 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC66A2RUB6 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.77■■□□□ 1.08
CCDC66A2RUB6 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC66A2RUB6 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC66A2RUB6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC66A2RUB6 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CCDC66A2RUB6 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC66A2RUB6 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC66A2RUB6 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC66A2RUB6 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC21.77■■□□□ 1.07
CCDC66A2RUB6 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.07
CCDC66A2RUB6 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC66A2RUB6 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC66A2RUB6 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC66A2RUB6 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC66A2RUB6 AR-207ENST00000612010 3896 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC66A2RUB6 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC66A2RUB6 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CCDC66A2RUB6 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC66A2RUB6 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC66A2RUB6 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.76■■□□□ 1.07
CCDC66A2RUB6 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC66A2RUB6 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC66A2RUB6 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.76■■□□□ 1.07
CCDC66A2RUB6 AL136967.2-201ENST00000623968 743 ntBASIC21.76■■□□□ 1.07
CCDC66A2RUB6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC66A2RUB6 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC66A2RUB6 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC66A2RUB6 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC66A2RUB6 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC66A2RUB6 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC66A2RUB6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC66A2RUB6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC66A2RUB6 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC66A2RUB6 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CCDC66A2RUB6 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC66A2RUB6 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC66A2RUB6 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC66A2RUB6 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC66A2RUB6 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.75■■□□□ 1.07
CCDC66A2RUB6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC66A2RUB6 AP004607.4-201ENST00000530158 1459 ntBASIC21.75■■□□□ 1.07
CCDC66A2RUB6 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC66A2RUB6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC66A2RUB6 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC66A2RUB6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC66A2RUB6 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC66A2RUB6 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CCDC66A2RUB6 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC66A2RUB6 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
CCDC66A2RUB6 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC66A2RUB6 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC66A2RUB6 AP000974.1-201ENST00000623909 2387 ntBASIC21.74■■□□□ 1.07
CCDC66A2RUB6 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC66A2RUB6 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC66A2RUB6 AL031432.3-201ENST00000607698 485 ntBASIC21.74■■□□□ 1.07
CCDC66A2RUB6 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms