Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TCRBV5S1A1TA0A578 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.18■□□□□ 0.98
TCRBV5S1A1TA0A578 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.18■□□□□ 0.98
TCRBV5S1A1TA0A578 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.18■□□□□ 0.98
TCRBV5S1A1TA0A578 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TCRBV5S1A1TA0A578 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TCRBV5S1A1TA0A578 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TCRBV5S1A1TA0A578 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.18■□□□□ 0.98
TCRBV5S1A1TA0A578 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TCRBV5S1A1TA0A578 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
TCRBV5S1A1TA0A578 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
TCRBV5S1A1TA0A578 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
TCRBV5S1A1TA0A578 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TCRBV5S1A1TA0A578 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TCRBV5S1A1TA0A578 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TCRBV5S1A1TA0A578 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.17■□□□□ 0.98
TCRBV5S1A1TA0A578 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.17■□□□□ 0.98
TCRBV5S1A1TA0A578 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
TCRBV5S1A1TA0A578 MIR663A-201ENST00000385250 93 ntBASIC21.17■□□□□ 0.98
TCRBV5S1A1TA0A578 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.17■□□□□ 0.98
TCRBV5S1A1TA0A578 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TCRBV5S1A1TA0A578 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
TCRBV5S1A1TA0A578 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.17■□□□□ 0.98
TCRBV5S1A1TA0A578 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TCRBV5S1A1TA0A578 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TCRBV5S1A1TA0A578 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
TCRBV5S1A1TA0A578 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TCRBV5S1A1TA0A578 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TCRBV5S1A1TA0A578 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TCRBV5S1A1TA0A578 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TCRBV5S1A1TA0A578 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TCRBV5S1A1TA0A578 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
TCRBV5S1A1TA0A578 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TCRBV5S1A1TA0A578 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
TCRBV5S1A1TA0A578 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
TCRBV5S1A1TA0A578 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TCRBV5S1A1TA0A578 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TCRBV5S1A1TA0A578 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
TCRBV5S1A1TA0A578 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
TCRBV5S1A1TA0A578 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TCRBV5S1A1TA0A578 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
TCRBV5S1A1TA0A578 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TCRBV5S1A1TA0A578 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TCRBV5S1A1TA0A578 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TCRBV5S1A1TA0A578 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.16■□□□□ 0.98
TCRBV5S1A1TA0A578 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
TCRBV5S1A1TA0A578 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.16■□□□□ 0.98
TCRBV5S1A1TA0A578 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TCRBV5S1A1TA0A578 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TCRBV5S1A1TA0A578 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TCRBV5S1A1TA0A578 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
TCRBV5S1A1TA0A578 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.15■□□□□ 0.98
TCRBV5S1A1TA0A578 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TCRBV5S1A1TA0A578 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.15■□□□□ 0.98
TCRBV5S1A1TA0A578 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.15■□□□□ 0.98
TCRBV5S1A1TA0A578 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TCRBV5S1A1TA0A578 AL691432.2-201ENST00000607222 2038 ntBASIC21.15■□□□□ 0.98
TCRBV5S1A1TA0A578 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.14■□□□□ 0.98
TCRBV5S1A1TA0A578 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.14■□□□□ 0.98
TCRBV5S1A1TA0A578 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TCRBV5S1A1TA0A578 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TCRBV5S1A1TA0A578 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.14■□□□□ 0.98
TCRBV5S1A1TA0A578 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TCRBV5S1A1TA0A578 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TCRBV5S1A1TA0A578 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
TCRBV5S1A1TA0A578 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.14■□□□□ 0.97
TCRBV5S1A1TA0A578 AF201337.1-201ENST00000520239 748 ntBASIC21.14■□□□□ 0.97
TCRBV5S1A1TA0A578 AL589743.5-201ENST00000616611 1050 ntBASIC21.14■□□□□ 0.97
TCRBV5S1A1TA0A578 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.14■□□□□ 0.97
TCRBV5S1A1TA0A578 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TCRBV5S1A1TA0A578 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TCRBV5S1A1TA0A578 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TCRBV5S1A1TA0A578 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TCRBV5S1A1TA0A578 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.13■□□□□ 0.97
TCRBV5S1A1TA0A578 PCDHAC2-203ENST00000615316 3011 ntBASIC21.13■□□□□ 0.97
TCRBV5S1A1TA0A578 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TCRBV5S1A1TA0A578 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TCRBV5S1A1TA0A578 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.13■□□□□ 0.97
TCRBV5S1A1TA0A578 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
TCRBV5S1A1TA0A578 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TCRBV5S1A1TA0A578 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.13■□□□□ 0.97
TCRBV5S1A1TA0A578 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TCRBV5S1A1TA0A578 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.13■□□□□ 0.97
TCRBV5S1A1TA0A578 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
TCRBV5S1A1TA0A578 AC105036.2-201ENST00000569468 176 ntBASIC21.13■□□□□ 0.97
TCRBV5S1A1TA0A578 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TCRBV5S1A1TA0A578 AFG3L1P-217ENST00000557444 2447 ntBASIC21.13■□□□□ 0.97
TCRBV5S1A1TA0A578 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TCRBV5S1A1TA0A578 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TCRBV5S1A1TA0A578 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
TCRBV5S1A1TA0A578 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TCRBV5S1A1TA0A578 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TCRBV5S1A1TA0A578 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.12■□□□□ 0.97
TCRBV5S1A1TA0A578 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TCRBV5S1A1TA0A578 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TCRBV5S1A1TA0A578 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TCRBV5S1A1TA0A578 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.12■□□□□ 0.97
TCRBV5S1A1TA0A578 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TCRBV5S1A1TA0A578 GUSBP6-202ENST00000438529 1198 ntBASIC21.12■□□□□ 0.97
TCRBV5S1A1TA0A578 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms