Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
TRAV25A0A0B4J276 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
TRAV25A0A0B4J276 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV25A0A0B4J276 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV25A0A0B4J276 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC15.21■□□□□ 0.02
TRAV25A0A0B4J276 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV25A0A0B4J276 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV25A0A0B4J276 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV25A0A0B4J276 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRAV25A0A0B4J276 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV25A0A0B4J276 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV25A0A0B4J276 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV25A0A0B4J276 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
TRAV25A0A0B4J276 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV25A0A0B4J276 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV25A0A0B4J276 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
TRAV25A0A0B4J276 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV25A0A0B4J276 MFF-205ENST00000354503 1085 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV25A0A0B4J276 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV25A0A0B4J276 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV25A0A0B4J276 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV25A0A0B4J276 GATS-209ENST00000454084 1030 ntTSL 3 BASIC15.2■□□□□ 0.02
TRAV25A0A0B4J276 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV25A0A0B4J276 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC15.2■□□□□ 0.02
TRAV25A0A0B4J276 AC083880.1-201ENST00000608266 535 ntBASIC15.2■□□□□ 0.02
TRAV25A0A0B4J276 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
TRAV25A0A0B4J276 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV25A0A0B4J276 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV25A0A0B4J276 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV25A0A0B4J276 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV25A0A0B4J276 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV25A0A0B4J276 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV25A0A0B4J276 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV25A0A0B4J276 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
TRAV25A0A0B4J276 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC15.19■□□□□ 0.02
TRAV25A0A0B4J276 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV25A0A0B4J276 AC092720.2-201ENST00000602388 1665 ntBASIC15.19■□□□□ 0.02
TRAV25A0A0B4J276 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
TRAV25A0A0B4J276 BID-203ENST00000399765 1879 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV25A0A0B4J276 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV25A0A0B4J276 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRAV25A0A0B4J276 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV25A0A0B4J276 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV25A0A0B4J276 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV25A0A0B4J276 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
TRAV25A0A0B4J276 AC023632.3-201ENST00000521633 145 ntBASIC15.19■□□□□ 0.02
TRAV25A0A0B4J276 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV25A0A0B4J276 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV25A0A0B4J276 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRAV25A0A0B4J276 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV25A0A0B4J276 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV25A0A0B4J276 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV25A0A0B4J276 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV25A0A0B4J276 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV25A0A0B4J276 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV25A0A0B4J276 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV25A0A0B4J276 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV25A0A0B4J276 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV25A0A0B4J276 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV25A0A0B4J276 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV25A0A0B4J276 AL390719.1-204ENST00000412397 1219 ntBASIC15.18■□□□□ 0.02
TRAV25A0A0B4J276 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC15.18■□□□□ 0.02
TRAV25A0A0B4J276 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV25A0A0B4J276 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRAV25A0A0B4J276 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV25A0A0B4J276 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV25A0A0B4J276 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
TRAV25A0A0B4J276 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRAV25A0A0B4J276 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV25A0A0B4J276 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV25A0A0B4J276 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV25A0A0B4J276 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV25A0A0B4J276 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV25A0A0B4J276 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV25A0A0B4J276 STK25-205ENST00000405883 1904 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV25A0A0B4J276 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV25A0A0B4J276 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV25A0A0B4J276 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC15.17■□□□□ 0.02
TRAV25A0A0B4J276 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV25A0A0B4J276 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV25A0A0B4J276 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV25A0A0B4J276 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV25A0A0B4J276 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV25A0A0B4J276 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV25A0A0B4J276 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV25A0A0B4J276 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV25A0A0B4J276 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV25A0A0B4J276 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV25A0A0B4J276 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV25A0A0B4J276 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRAV25A0A0B4J276 HLA-G-202ENST00000376815 851 ntBASIC15.17■□□□□ 0.02
TRAV25A0A0B4J276 HLA-G-203ENST00000376818 1127 ntBASIC15.17■□□□□ 0.02
TRAV25A0A0B4J276 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRAV25A0A0B4J276 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC15.17■□□□□ 0.02
TRAV25A0A0B4J276 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC15.17■□□□□ 0.02
TRAV25A0A0B4J276 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC15.17■□□□□ 0.02
TRAV25A0A0B4J276 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV25A0A0B4J276 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV25A0A0B4J276 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV25A0A0B4J276 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms