Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV12-3A0A0B4J271 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV12-3A0A0B4J271 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV12-3A0A0B4J271 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV12-3A0A0B4J271 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV12-3A0A0B4J271 AC019069.1-201ENST00000610008 1333 ntBASIC15.02■□□□□ -0
TRAV12-3A0A0B4J271 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV12-3A0A0B4J271 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC15.02■□□□□ -0
TRAV12-3A0A0B4J271 AC007322.3-201ENST00000426526 701 ntBASIC15.02■□□□□ -0
TRAV12-3A0A0B4J271 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC15.02■□□□□ -0
TRAV12-3A0A0B4J271 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC15.02■□□□□ -0
TRAV12-3A0A0B4J271 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TRAV12-3A0A0B4J271 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV12-3A0A0B4J271 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC15.02■□□□□ -0
TRAV12-3A0A0B4J271 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC15.02■□□□□ -0
TRAV12-3A0A0B4J271 UBE2DNL-204ENST00000602536 740 ntBASIC15.02■□□□□ -0
TRAV12-3A0A0B4J271 MIR2861-201ENST00000636310 90 ntBASIC15.02■□□□□ -0
TRAV12-3A0A0B4J271 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV12-3A0A0B4J271 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV12-3A0A0B4J271 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV12-3A0A0B4J271 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV12-3A0A0B4J271 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
TRAV12-3A0A0B4J271 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC15.02□□□□□ -0.01
TRAV12-3A0A0B4J271 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC15.02□□□□□ -0.01
TRAV12-3A0A0B4J271 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV12-3A0A0B4J271 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
TRAV12-3A0A0B4J271 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 AC091799.1-201ENST00000422823 811 ntBASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 SLC7A5P1-201ENST00000568957 537 ntBASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 AC243732.1-201ENST00000612648 864 ntBASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV12-3A0A0B4J271 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC15□□□□□ -0.01
TRAV12-3A0A0B4J271 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV12-3A0A0B4J271 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV12-3A0A0B4J271 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV12-3A0A0B4J271 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV12-3A0A0B4J271 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV12-3A0A0B4J271 ME2-218ENST00000640965 2476 ntTSL 5 BASIC15□□□□□ -0.01
TRAV12-3A0A0B4J271 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC15□□□□□ -0.01
TRAV12-3A0A0B4J271 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV12-3A0A0B4J271 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV12-3A0A0B4J271 PARP1-202ENST00000366792 553 ntTSL 3 BASIC15□□□□□ -0.01
TRAV12-3A0A0B4J271 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC15□□□□□ -0.01
TRAV12-3A0A0B4J271 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC15□□□□□ -0.01
TRAV12-3A0A0B4J271 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC15□□□□□ -0.01
TRAV12-3A0A0B4J271 NTF6G-201ENST00000591094 616 ntBASIC15□□□□□ -0.01
TRAV12-3A0A0B4J271 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
TRAV12-3A0A0B4J271 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TRAV12-3A0A0B4J271 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV12-3A0A0B4J271 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV12-3A0A0B4J271 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TRAV12-3A0A0B4J271 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC15□□□□□ -0.01
TRAV12-3A0A0B4J271 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC15□□□□□ -0.01
TRAV12-3A0A0B4J271 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
TRAV12-3A0A0B4J271 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC15□□□□□ -0.01
TRAV12-3A0A0B4J271 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV12-3A0A0B4J271 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV12-3A0A0B4J271 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV12-3A0A0B4J271 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV12-3A0A0B4J271 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
TRAV12-3A0A0B4J271 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV12-3A0A0B4J271 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
TRAV12-3A0A0B4J271 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV12-3A0A0B4J271 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TRAV12-3A0A0B4J271 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms