Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TRBV6-7A0A0A0MS04 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV6-7A0A0A0MS04 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.92■□□□□ 0.3
TRBV6-7A0A0A0MS04 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV6-7A0A0A0MS04 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.92■□□□□ 0.3
TRBV6-7A0A0A0MS04 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV6-7A0A0A0MS04 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.92■□□□□ 0.3
TRBV6-7A0A0A0MS04 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV6-7A0A0A0MS04 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV6-7A0A0A0MS04 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.92■□□□□ 0.3
TRBV6-7A0A0A0MS04 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRBV6-7A0A0A0MS04 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TRBV6-7A0A0A0MS04 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV6-7A0A0A0MS04 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TRBV6-7A0A0A0MS04 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TRBV6-7A0A0A0MS04 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV6-7A0A0A0MS04 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TRBV6-7A0A0A0MS04 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV6-7A0A0A0MS04 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.91■□□□□ 0.3
TRBV6-7A0A0A0MS04 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TRBV6-7A0A0A0MS04 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
TRBV6-7A0A0A0MS04 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV6-7A0A0A0MS04 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16.91■□□□□ 0.3
TRBV6-7A0A0A0MS04 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV6-7A0A0A0MS04 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV6-7A0A0A0MS04 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TRBV6-7A0A0A0MS04 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TRBV6-7A0A0A0MS04 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.91■□□□□ 0.3
TRBV6-7A0A0A0MS04 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV6-7A0A0A0MS04 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.91■□□□□ 0.3
TRBV6-7A0A0A0MS04 LINC02228-203ENST00000641970 1355 ntBASIC16.9■□□□□ 0.3
TRBV6-7A0A0A0MS04 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV6-7A0A0A0MS04 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.9■□□□□ 0.3
TRBV6-7A0A0A0MS04 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV6-7A0A0A0MS04 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.9■□□□□ 0.3
TRBV6-7A0A0A0MS04 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.9■□□□□ 0.3
TRBV6-7A0A0A0MS04 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TRBV6-7A0A0A0MS04 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV6-7A0A0A0MS04 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.9■□□□□ 0.3
TRBV6-7A0A0A0MS04 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TRBV6-7A0A0A0MS04 SLC7A5P2-201ENST00000553010 536 ntBASIC16.9■□□□□ 0.3
TRBV6-7A0A0A0MS04 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC16.9■□□□□ 0.3
TRBV6-7A0A0A0MS04 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.9■□□□□ 0.3
TRBV6-7A0A0A0MS04 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV6-7A0A0A0MS04 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV6-7A0A0A0MS04 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV6-7A0A0A0MS04 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.9■□□□□ 0.3
TRBV6-7A0A0A0MS04 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV6-7A0A0A0MS04 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV6-7A0A0A0MS04 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV6-7A0A0A0MS04 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV6-7A0A0A0MS04 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.89■□□□□ 0.3
TRBV6-7A0A0A0MS04 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
TRBV6-7A0A0A0MS04 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV6-7A0A0A0MS04 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV6-7A0A0A0MS04 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV6-7A0A0A0MS04 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV6-7A0A0A0MS04 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV6-7A0A0A0MS04 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV6-7A0A0A0MS04 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV6-7A0A0A0MS04 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.89■□□□□ 0.29
TRBV6-7A0A0A0MS04 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV6-7A0A0A0MS04 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.89■□□□□ 0.29
TRBV6-7A0A0A0MS04 AC105265.2-201ENST00000467189 838 ntBASIC16.89■□□□□ 0.29
TRBV6-7A0A0A0MS04 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.89■□□□□ 0.29
TRBV6-7A0A0A0MS04 AP001160.3-201ENST00000601484 763 ntBASIC16.89■□□□□ 0.29
TRBV6-7A0A0A0MS04 AC104187.1-201ENST00000607510 612 ntBASIC16.89■□□□□ 0.29
TRBV6-7A0A0A0MS04 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV6-7A0A0A0MS04 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.89■□□□□ 0.29
TRBV6-7A0A0A0MS04 LETM1P2-201ENST00000597330 2178 ntBASIC16.89■□□□□ 0.29
TRBV6-7A0A0A0MS04 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV6-7A0A0A0MS04 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV6-7A0A0A0MS04 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV6-7A0A0A0MS04 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.89■□□□□ 0.29
TRBV6-7A0A0A0MS04 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TRBV6-7A0A0A0MS04 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TRBV6-7A0A0A0MS04 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV6-7A0A0A0MS04 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-7A0A0A0MS04 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-7A0A0A0MS04 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TRBV6-7A0A0A0MS04 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-7A0A0A0MS04 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.88■□□□□ 0.29
TRBV6-7A0A0A0MS04 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-7A0A0A0MS04 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-7A0A0A0MS04 KRT18P20-201ENST00000548986 1279 ntBASIC16.88■□□□□ 0.29
TRBV6-7A0A0A0MS04 CCDC92B-201ENST00000575506 885 ntBASIC16.88■□□□□ 0.29
TRBV6-7A0A0A0MS04 AC005837.3-201ENST00000612163 286 ntBASIC16.88■□□□□ 0.29
TRBV6-7A0A0A0MS04 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-7A0A0A0MS04 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.88■□□□□ 0.29
TRBV6-7A0A0A0MS04 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TRBV6-7A0A0A0MS04 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-7A0A0A0MS04 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-7A0A0A0MS04 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-7A0A0A0MS04 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.88■□□□□ 0.29
TRBV6-7A0A0A0MS04 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-7A0A0A0MS04 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-7A0A0A0MS04 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-7A0A0A0MS04 AL158211.5-201ENST00000623583 2518 ntBASIC16.88■□□□□ 0.29
TRBV6-7A0A0A0MS04 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-7A0A0A0MS04 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms