Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SNX18Q96RF0 SLC9B2-201ENST00000362026 2300 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SNX18Q96RF0 AC135731.2-201ENST00000603029 2098 ntBASIC7.5□□□□□ -1.21
SNX18Q96RF0 GLT8D2-202ENST00000546436 1578 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
SNX18Q96RF0 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SNX18Q96RF0 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
SNX18Q96RF0 AC104964.2-201ENST00000562242 4641 ntBASIC7.5□□□□□ -1.21
SNX18Q96RF0 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
SNX18Q96RF0 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SNX18Q96RF0 AL391262.1-201ENST00000556558 1992 ntBASIC7.5□□□□□ -1.21
SNX18Q96RF0 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
SNX18Q96RF0 COPS5-201ENST00000357849 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SNX18Q96RF0 CETN2-201ENST00000370277 1454 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SNX18Q96RF0 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
SNX18Q96RF0 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
SNX18Q96RF0 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
SNX18Q96RF0 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SNX18Q96RF0 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
SNX18Q96RF0 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SNX18Q96RF0 STXBP5-AS1-209ENST00000606831 2025 ntTSL 5 BASIC7.49□□□□□ -1.21
SNX18Q96RF0 ASAP1-IT2-201ENST00000626977 2031 ntBASIC7.49□□□□□ -1.21
SNX18Q96RF0 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
SNX18Q96RF0 AL353898.3-201ENST00000624679 1755 ntBASIC7.49□□□□□ -1.21
SNX18Q96RF0 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SNX18Q96RF0 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC7.49□□□□□ -1.21
SNX18Q96RF0 FMO5-202ENST00000369272 2168 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SNX18Q96RF0 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC7.49□□□□□ -1.21
SNX18Q96RF0 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC7.49□□□□□ -1.21
SNX18Q96RF0 MR1-205ENST00000434571 7479 ntTSL 5 BASIC7.49□□□□□ -1.21
SNX18Q96RF0 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SNX18Q96RF0 FDFT1-212ENST00000528643 1909 ntTSL 2 BASIC7.49□□□□□ -1.21
SNX18Q96RF0 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
SNX18Q96RF0 UTP23-201ENST00000309822 3699 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SNX18Q96RF0 CHCHD7-207ENST00000518801 1670 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SNX18Q96RF0 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SNX18Q96RF0 TSSK4-201ENST00000287913 1257 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
SNX18Q96RF0 TGIF2LY-201ENST00000321217 905 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SNX18Q96RF0 RNA5SP145-201ENST00000363124 125 ntBASIC7.49□□□□□ -1.21
SNX18Q96RF0 PDCL3P7-201ENST00000392251 712 ntBASIC7.49□□□□□ -1.21
SNX18Q96RF0 RPL24-201ENST00000394077 623 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SNX18Q96RF0 SLC8A1-AS1-203ENST00000418854 545 ntTSL 4 BASIC7.49□□□□□ -1.21
SNX18Q96RF0 PPP2R2DP1-201ENST00000420526 637 ntBASIC7.49□□□□□ -1.21
SNX18Q96RF0 RPS23P8-201ENST00000429775 330 ntBASIC7.49□□□□□ -1.21
SNX18Q96RF0 RPE-207ENST00000435437 858 ntTSL 2 BASIC7.49□□□□□ -1.21
SNX18Q96RF0 SDHDP2-201ENST00000436937 465 ntBASIC7.49□□□□□ -1.21
SNX18Q96RF0 ASH2LP1-201ENST00000438037 985 ntBASIC7.49□□□□□ -1.21
SNX18Q96RF0 AC104843.1-201ENST00000451203 319 ntBASIC7.49□□□□□ -1.21
SNX18Q96RF0 RN7SL496P-201ENST00000470372 290 ntBASIC7.49□□□□□ -1.21
SNX18Q96RF0 RN7SL702P-201ENST00000488394 292 ntBASIC7.49□□□□□ -1.21
SNX18Q96RF0 LINC02121-201ENST00000507950 432 ntTSL 2 BASIC7.49□□□□□ -1.21
SNX18Q96RF0 SNCA-211ENST00000508895 905 ntAPPRIS P1 TSL 3 BASIC7.49□□□□□ -1.21
SNX18Q96RF0 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC7.49□□□□□ -1.21
SNX18Q96RF0 LINC00499-204ENST00000515282 579 ntTSL 5 BASIC7.49□□□□□ -1.21
SNX18Q96RF0 HTR4-204ENST00000517929 1201 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SNX18Q96RF0 CCAR2-208ENST00000521301 337 ntTSL 3 BASIC7.49□□□□□ -1.21
SNX18Q96RF0 SCARNA9-201ENST00000530422 353 ntBASIC7.49□□□□□ -1.21
SNX18Q96RF0 SLC5A4P1-201ENST00000532944 612 ntBASIC7.49□□□□□ -1.21
SNX18Q96RF0 AP002892.2-201ENST00000544195 560 ntTSL 4 BASIC7.49□□□□□ -1.21
SNX18Q96RF0 AL352979.1-201ENST00000554238 297 ntBASIC7.49□□□□□ -1.21
SNX18Q96RF0 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC7.49□□□□□ -1.21
SNX18Q96RF0 LINC02137-201ENST00000561906 644 ntTSL 3 BASIC7.49□□□□□ -1.21
SNX18Q96RF0 AC026150.3-201ENST00000602595 499 ntBASIC7.49□□□□□ -1.21
SNX18Q96RF0 AC093458.1-201ENST00000608912 222 ntBASIC7.49□□□□□ -1.21
SNX18Q96RF0 SNCA-212ENST00000611107 297 ntTSL 5 BASIC7.49□□□□□ -1.21
SNX18Q96RF0 AC105339.4-201ENST00000624471 737 ntBASIC7.49□□□□□ -1.21
SNX18Q96RF0 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC7.49□□□□□ -1.21
SNX18Q96RF0 AC068631.1-215ENST00000630331 490 ntTSL 5 BASIC7.49□□□□□ -1.21
SNX18Q96RF0 LINC00604-202ENST00000637924 684 ntTSL 5 BASIC7.49□□□□□ -1.21
SNX18Q96RF0 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
SNX18Q96RF0 LRRC37A11P-202ENST00000579258 3717 ntBASIC7.49□□□□□ -1.21
SNX18Q96RF0 SPRY1-202ENST00000394339 2504 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SNX18Q96RF0 AFF1-211ENST00000544085 3644 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
SNX18Q96RF0 APH1B-201ENST00000261879 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SNX18Q96RF0 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC7.49□□□□□ -1.21
SNX18Q96RF0 APP-209ENST00000440126 2846 ntTSL 2 BASIC7.49□□□□□ -1.21
SNX18Q96RF0 DYDC2-207ENST00000616870 1723 ntAPPRIS P3 TSL 3 BASIC7.49□□□□□ -1.21
SNX18Q96RF0 PTGS2-201ENST00000367468 4514 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SNX18Q96RF0 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SNX18Q96RF0 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SNX18Q96RF0 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SNX18Q96RF0 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
SNX18Q96RF0 CYCS-201ENST00000305786 4098 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SNX18Q96RF0 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC7.48□□□□□ -1.21
SNX18Q96RF0 NELL2-202ENST00000395487 3203 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SNX18Q96RF0 VAMP3-201ENST00000054666 2205 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SNX18Q96RF0 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
SNX18Q96RF0 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SNX18Q96RF0 AC117457.1-201ENST00000614557 1391 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
SNX18Q96RF0 AC105383.1-202ENST00000505289 2820 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SNX18Q96RF0 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SNX18Q96RF0 ZNF2-204ENST00000617923 3885 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SNX18Q96RF0 MORF4L2-203ENST00000422154 1983 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SNX18Q96RF0 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC7.48□□□□□ -1.21
SNX18Q96RF0 BTK-201ENST00000308731 2579 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SNX18Q96RF0 AC145138.1-201ENST00000512908 2851 ntBASIC7.48□□□□□ -1.21
SNX18Q96RF0 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SNX18Q96RF0 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC7.48□□□□□ -1.21
SNX18Q96RF0 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
SNX18Q96RF0 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SNX18Q96RF0 HRH4-201ENST00000256906 3668 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms